.. bids

Welcome to pybids's documentation!
====================================

``pybids`` is a set of tools for working with Brain Imaging Data Structure (BIDS) datasets.
For more information about BIDS, please visit the `BIDS website`_.

.. _BIDS website: http://bids.neuroimaging.io

Contents
==========

.. toctree::
   :maxdepth: 2

   user_guide.rst
   api.rst
   whats_new.rst


Citing pybids
=============
To cite ``pybids``, please cite the original paper proposing BIDS:

  Gorgolewski, K. J., Auer, T., Calhoun, V. D., Craddock, R. C., Das, S.,
  Duff, E. P., ... & Handwerker, D. A. (2016). The brain imaging data structure,
  a format for organizing and describing outputs of neuroimaging experiments.
  Scientific Data, 3, 160044. https://doi.org/10.1038/sdata.2016.44

Indices and tables
==================

* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`
