is_continue == false
One of the 2 unfiltered half-maps: == Refine3D/new_good_images/global_C3_frames_shiny/local_Ali_half1_class001_unfil.mrc
Output rootname == local_Ali_postprocess
Perform auto-masking? == Yes
Initial binarisation threshold: == 0.02
Extend binary map this many pixels: == 3
Add a soft-edge of this many pixels: == 3
Provide your own mask? == No
User-provided mask: == 
Estimate B-factor automatically? == Yes
Lowest resolution for auto-B fit (A): == 10
Use your own B-factor? == No
User-provided B-factor: == -1000
MTF of the detector (STAR file) == 
Skip FSC-weighting? == No
Ad-hoc low-pass filter (A): == 5
Submit to queue? == No
Queue name:  == openmpi
Queue submit command: == qsub
Standard submission script: == /public/EM/RELION/relion/bin/qsub.csh
Additional arguments: ==