Welcome to the RELION sub-tomogram averaging tutorial.

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The input data is in ./Tomograms/ .

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Two scripts relion_prepare_subtomograms.py and relion_2Dto3D_star.py are needed for this tutorial. 
Please get these scripts from the RELION wiki.

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For your convenience, we have placed the pre-calculated results in the directory ./AnticipatedResults/

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Particles were extracted in the ./AnticipatedResults/Particles/ directory.

2D classification was conducted in ./AnticipatedResults/Class2D/run1
3D auto-refine was done in ./AnticipatedResults/Refine3D/run2. Please note that different runs lead to slightly differing final resolution.
3D classification was done in ./AnticipatedResults/Class3D/run2

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Please report problems to tbharat@mrc-lmb.cam.ac.uk or scheres@mrc-lmb.cam.ac.uk