is_continue == false
One of the 2 unfiltered half-maps: == Refine3D/run2_half1_class001_unfil.mrc
Output rootname == run2_post
Perform auto-masking? == Yes
Initial binarisation threshold: == 0.02
Extend binary map this many pixels: == 3
Add a soft-edge of this many pixels: == 5
Provide your own mask? == No
User-provided mask: == Refine3D/post_b_automask.mrc
Estimate B-factor automatically? == No
Lowest resolution for auto-B fit (A): == 10
Use your own B-factor? == No
User-provided B-factor: == -1000
MTF of the detector (STAR file) == mtf_k2_300kV.star
Skip FSC-weighting? == No
Ad-hoc low-pass filter (A): == 10
Submit to queue? == No
Queue name:  == openmpi
Queue submit command: == qsub
Standard submission script: == /public/EM/RELION/relion-prerelease/bin/qsub.csh
Additional arguments: ==