* using log directory 'd:/Rcompile/CRANpkg/local/3.0/sca.Rcheck'
* using R version 3.0.3 (2014-03-06)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* checking for file 'sca/DESCRIPTION' ... OK
* this is package 'sca' version '0.8-9'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'sca' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking for unstated dependencies in tests ... OK
* checking tests ... OK
  Running '3ex.R'
  Comparing '3ex.Rout' to '3ex.Rout.save' ... OK
  Running 'artif3.R'
  Comparing 'artif3.Rout' to 'artif3.Rout.save' ...137,140c137,140
<  [6,]           1 , + +
<  [7,]           , 1 + ,
<  [8,]           + + 1 +
<  [9,]           + , + 1
---
>  [6,]           1 , , ,
>  [7,]           , 1 + +
>  [8,]           , + 1 +
>  [9,]           , + + 1
158,159c158,159
< V2  0  1  0 -1  0
< V3  0  1  0  0  0
---
> V2  0  1  0  0  0
> V3  0  1  0 -1  0
162,163c162,163
< V6  1  0  0  0  1
< V7  1  0  0  0 -2
---
> V6  1  0  0  0  2
> V7  1  0  0  0 -1
165c165
< V9  1  0  0  0  1
---
> V9  1  0  0  0 -1
168c168
<  38.69 % 28.58 % 20.12 % 3.30 % 2.50 % 
---
>  38.69 % 28.58 % 20.11 % 3.31 % 2.51 % 
170c170
<  37.94 % 28.14 % 20.69 % 2.78 % 2.78 % 
---
>  37.93 % 28.14 % 20.69 % 2.76 % 2.87 % 
172,174c172,174
< Extracted variability PCA: 93.19 % 
< Extracted variability SCA: 91.60 % 
< Optimality SCA           : 98.29 % 
---
> Extracted variability PCA: 93.20 % 
> Extracted variability SCA: 91.66 % 
> Optimality SCA           : 98.35 % 
178,182c178,182
< B1  1.00  0.05 -0.08 -0.05  0.03
< B2  0.05  1.00 -0.10  0.00  0.03
< B3 -0.08 -0.10  1.00  0.13 -0.23
< D4 -0.05  0.00  0.13  1.00 -0.25
< D5  0.03  0.03 -0.23 -0.25  1.00
---
> B1  1.00 -0.05 -0.08 -0.02 -0.05
> B2 -0.05  1.00  0.10  0.00  0.04
> B3 -0.08  0.10  1.00  0.13  0.24
> D4 -0.02  0.00  0.13  1.00  0.24
> D5 -0.05  0.04  0.24  0.24  1.00
184c184
< Max (abs) correlation: 0.25 ( D4 - D5 ) 
---
> Max (abs) correlation: 0.24 ( D4 - D5 ) 
203,204c203,204
< V2  0  1  0 -1  0
< V3  0  1  0  0  0
---
> V2  0  1  0  0  0
> V3  0  1  0 -1  0
207,208c207,208
< V6  1  0  0  0  1
< V7  1  0  0  0 -2
---
> V6  1  0  0  0  2
> V7  1  0  0  0 -1
210c210
< V9  1  0  0  0  1
---
> V9  1  0  0  0 -1
213c213
<  38.69 % 28.58 % 20.12 % 3.30 % 2.50 % 
---
>  38.69 % 28.58 % 20.11 % 3.31 % 2.51 % 
215c215
<  37.94 % 28.14 % 20.69 % 2.78 % 2.78 % 
---
>  37.93 % 28.14 % 20.69 % 2.76 % 2.87 % 
217,219c217,219
< Extracted variability PCA: 93.19 % 
< Extracted variability SCA: 91.60 % 
< Optimality SCA           : 98.29 % 
---
> Extracted variability PCA: 93.20 % 
> Extracted variability SCA: 91.66 % 
> Optimality SCA           : 98.35 % 
223,227c223,227
< B1  1.00  0.05 -0.08 -0.05  0.03
< B2  0.05  1.00 -0.10  0.00  0.03
< B3 -0.08 -0.10  1.00  0.13 -0.23
< D4 -0.05  0.00  0.13  1.00 -0.25
< D5  0.03  0.03 -0.23 -0.25  1.00
---
> B1  1.00 -0.05 -0.08 -0.02 -0.05
> B2 -0.05  1.00  0.10  0.00  0.04
> B3 -0.08  0.10  1.00  0.13  0.24
> D4 -0.02  0.00  0.13  1.00  0.24
> D5 -0.05  0.04  0.24  0.24  1.00
229c229
< Max (abs) correlation: 0.25 ( D4 - D5 ) 
---
> Max (abs) correlation: 0.24 ( D4 - D5 ) 
242,243c242,243
<   ..$ varpc : num [1:5] 0.387 0.286 0.201 0.033 0.025
<   ..$ varsc : Named num [1:5] 0.3794 0.2814 0.2069 0.0278 0.0278
---
>   ..$ varpc : num [1:5] 0.3869 0.2858 0.2011 0.0331 0.0251
>   ..$ varsc : Named num [1:5] 0.3793 0.2814 0.2069 0.0276 0.0287
246c246
<   ..$ cumsc : num 0.916
---
>   ..$ cumsc : num 0.917
248c248
<   ..$ corsc : num [1:5, 1:5] 1 0.0457 -0.082 -0.0545 0.0265 ...
---
>   ..$ corsc : num [1:5, 1:5] 1 -0.0454 -0.0827 -0.0239 -0.0494 ...
255c255
<   .. ..$ val: num 0.252
---
>   .. ..$ val: num 0.241
262c262
<  $ vardata    : num [1:9, 1:9] 1 0.7497 0.7745 -0.0343 -0.044 ...
---
>  $ vardata    : num [1:9, 1:9] 1 0.773 0.752 0.11 0.158 ...
291,296c291,296
< [13,]                         1 * + * * +                        
< [14,]                         * 1 + * * +                        
< [15,]                         + + 1 + + +                        
< [16,]                         * * + 1 * +                        
< [17,]                         * * + * 1 *                        
< [18,]                         + + + + * 1                        
---
> [13,]                         1 + * + + *                        
> [14,]                         + 1 + * * *                        
> [15,]                         * + 1 + + +                        
> [16,]                         + * + 1 * +                        
> [17,]                         + * + * 1 *                        
> [18,]                         * * + + * 1                        
299,306c299,306
< [21,]                                         1 + + , + + , + + ,
< [22,]                                         + 1 + , + + + + + +
< [23,]                                         + + 1 , + + + + + +
< [24,]                                         , , , 1 , , , , + ,
< [25,]                                         + + + , 1 + + + + +
< [26,]                                         + + + , + 1 + + + +
< [27,]                                         , + + , + + 1 + + +
< [28,]                                         + + + , + + + 1 + +
---
> [21,]                                         1 + + + , + + + + +
> [22,]                                         + 1 + + + + + + + +
> [23,]                                         + + 1 + + + + + + +
> [24,]                                         + + + 1 , + + , + ,
> [25,]                                         , + + , 1 + , + + ,
> [26,]                                         + + + + + 1 + + + +
> [27,]                                         + + + + , + 1 + + ,
> [28,]                                         + + + , + + + 1 + ,
308c308
< [30,]                                         , + + , + + + + + 1
---
> [30,]                                         + + + , , + , , + 1
325,326c325,326
< V1   1  0  0  0  0
< V2   1  0  0  0  3
---
> V1   1  0  0  0  1
> V2   1  0  0  0 -1
328,330c328,330
< V4   1  0  0  0  0
< V5   1  0  0  0 -4
< V6   1  0  0  0 -4
---
> V4   1  0  0  0 -1
> V5   1  0  0  0 -1
> V6   1  0  0  0  0
332,336c332,336
< V8   1  0  0  0  3
< V9   1  0  0  0  3
< V10  1  0  0  0  3
< V11  1  0  0  0 -4
< V12  1  0  0  0  0
---
> V8   1  0  0  0  0
> V9   1  0  0  0  1
> V10  1  0  0  0  0
> V11  1  0  0  0  0
> V12  1  0  0  0  1
357c357
<  30.05 % 27.58 % 18.22 % 6.38 % 1.17 % 
---
>  30.05 % 27.59 % 18.22 % 6.38 % 1.17 % 
359c359
<  29.88 % 27.60 % 18.29 % 6.35 % 1.11 % 
---
>  29.87 % 27.61 % 18.29 % 6.35 % 1.14 % 
362,363c362,363
< Extracted variability SCA: 83.18 % 
< Optimality SCA           : 99.73 % 
---
> Extracted variability SCA: 83.21 % 
> Optimality SCA           : 99.76 % 
367,371c367,371
< B1  1.00 -0.01 -0.04  0.00  0.02
< B2 -0.01  1.00 -0.01  0.01 -0.01
< B3 -0.04 -0.01  1.00  0.01 -0.02
< B4  0.00  0.01  0.01  1.00 -0.01
< D5  0.02 -0.01 -0.02 -0.01  1.00
---
> B1  1.00 0.01 -0.04  0.00 0.02
> B2  0.01 1.00  0.01  0.01 0.00
> B3 -0.04 0.01  1.00 -0.01 0.02
> B4  0.00 0.01 -0.01  1.00 0.02
> D5  0.02 0.00  0.02  0.02 1.00
391,392c391,392
< V1   1  0  0  0  0
< V2   1  0  0  0  3
---
> V1   1  0  0  0  1
> V2   1  0  0  0 -1
394,396c394,396
< V4   1  0  0  0  0
< V5   1  0  0  0 -4
< V6   1  0  0  0 -4
---
> V4   1  0  0  0 -1
> V5   1  0  0  0 -1
> V6   1  0  0  0  0
398,402c398,402
< V8   1  0  0  0  3
< V9   1  0  0  0  3
< V10  1  0  0  0  3
< V11  1  0  0  0 -4
< V12  1  0  0  0  0
---
> V8   1  0  0  0  0
> V9   1  0  0  0  1
> V10  1  0  0  0  0
> V11  1  0  0  0  0
> V12  1  0  0  0  1
423c423
<  30.05 % 27.58 % 18.22 % 6.38 % 1.17 % 
---
>  30.05 % 27.59 % 18.22 % 6.38 % 1.17 % 
425c425
<  29.88 % 27.60 % 18.29 % 6.35 % 1.11 % 
---
>  29.87 % 27.61 % 18.29 % 6.35 % 1.14 % 
428,429c428,429
< Extracted variability SCA: 83.18 % 
< Optimality SCA           : 99.73 % 
---
> Extracted variability SCA: 83.21 % 
> Optimality SCA           : 99.76 % 
433,437c433,437
< B1  1.00 -0.01 -0.04  0.00  0.02
< B2 -0.01  1.00 -0.01  0.01 -0.01
< B3 -0.04 -0.01  1.00  0.01 -0.02
< B4  0.00  0.01  0.01  1.00 -0.01
< D5  0.02 -0.01 -0.02 -0.01  1.00
---
> B1  1.00 0.01 -0.04  0.00 0.02
> B2  0.01 1.00  0.01  0.01 0.00
> B3 -0.04 0.01  1.00 -0.01 0.02
> B4  0.00 0.01 -0.01  1.00 0.02
> D5  0.02 0.00  0.02  0.02 1.00
452,453c452,453
<   ..$ varpc : num [1:5] 0.3005 0.2758 0.1822 0.0638 0.0117
<   ..$ varsc : Named num [1:5] 0.2988 0.276 0.1829 0.0635 0.0111
---
>   ..$ varpc : num [1:5] 0.3005 0.2759 0.1822 0.0638 0.0117
>   ..$ varsc : Named num [1:5] 0.2987 0.2761 0.1829 0.0635 0.0114
457,458c457,458
<   ..$ opt   : num 0.997
<   ..$ corsc : num [1:5, 1:5] 1 -0.0125 -0.0443 0.0043 0.0173 ...
---
>   ..$ opt   : num 0.998
>   ..$ corsc : num [1:5, 1:5] 1 0.0125 -0.04425 -0.00436 0.01655 ...
472c472
<  $ vardata    : num [1:30, 1:30] 1 0.737 0.74 0.716 0.739 ...
---
>  $ vardata    : num [1:30, 1:30] 1 0.718 0.713 0.687 0.712 ...
* checking PDF version of manual ... OK