* using log directory 'd:/Rcompile/CRANpkg/local/3.0/coenocliner.Rcheck' * using R version 3.0.3 (2014-03-06) * using platform: i386-w64-mingw32 (32-bit) * using session charset: ISO8859-1 * checking for file 'coenocliner/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'coenocliner' version '0.1-0' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'coenocliner' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking differences from 'coenocliner-Ex.Rout' to 'coenocliner-Ex.Rout.save' ... 206,208d205 < Warning in rbeta(n = n, shape1 = a, shape2 = b) : NAs produced < Warning in rbinom(n = n, size = size, prob = rbeta(n = n, shape1 = a, shape2 = b)) : < NAs produced Warning message: running command 'diff -bw "D:\temp\RtmpaSmj2e\Rdiffa24b02f3f7496" "D:\temp\RtmpaSmj2e\Rdiffb24b02c5413d4"' had status 1 OK * checking for unstated dependencies in tests ... OK * checking tests ... OK Running 'test-all.R' * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK