* using log directory 'd:/Rcompile/CRANpkg/local/2.16/biganalytics.Rcheck' * using R Under development (unstable) (2012-09-15 r60721) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'biganalytics/DESCRIPTION' ... OK * this is package 'biganalytics' version '1.0.14' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking whether package 'biganalytics' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking compiled code ... OK * checking examples ... ** running examples for arch 'i386' ... ERROR Running examples in 'biganalytics-Ex.R' failed The error most likely occurred in: > ### Name: biganalytics-package > ### Title: biganalytics: A library of utilities for big.matrix objects of > ### package bigmemory. Some work with R matrices, independently of > ### bigmemory. > ### Aliases: biganalytics-package biganalytics > ### Keywords: package > > ### ** Examples > > # Our examples are all trivial in size, rather than burning huge amounts > # of memory simply to demonstrate the package functionality. > > library(bigmemory) > > x <- big.matrix(5, 2, type="integer", init=0, + dimnames=list(NULL, c("alpha", "beta"))) > x An object of class "big.matrix" Slot "address": > x[,] alpha beta [1,] 0 0 [2,] 0 0 [3,] 0 0 [4,] 0 0 [5,] 0 0 > x[,1] <- 1:5 > x[,] alpha beta [1,] 1 0 [2,] 2 0 [3,] 3 0 [4,] 4 0 [5,] 5 0 > mean(x) Error in mean(colmean(x, ...)) : error in evaluating the argument 'x' in selecting a method for function 'mean': Error in .Call("CGetType", x@address) : "CGetType" not resolved from current namespace (biganalytics) Calls: colmean -> colmean -> .Call Calls: mean -> mean -> mean Execution halted ** running examples for arch 'x64' ... ERROR Running examples in 'biganalytics-Ex.R' failed The error most likely occurred in: > ### Name: biganalytics-package > ### Title: biganalytics: A library of utilities for big.matrix objects of > ### package bigmemory. Some work with R matrices, independently of > ### bigmemory. > ### Aliases: biganalytics-package biganalytics > ### Keywords: package > > ### ** Examples > > # Our examples are all trivial in size, rather than burning huge amounts > # of memory simply to demonstrate the package functionality. > > library(bigmemory) > > x <- big.matrix(5, 2, type="integer", init=0, + dimnames=list(NULL, c("alpha", "beta"))) > x An object of class "big.matrix" Slot "address": > x[,] alpha beta [1,] 0 0 [2,] 0 0 [3,] 0 0 [4,] 0 0 [5,] 0 0 > x[,1] <- 1:5 > x[,] alpha beta [1,] 1 0 [2,] 2 0 [3,] 3 0 [4,] 4 0 [5,] 5 0 > mean(x) Error in mean(colmean(x, ...)) : error in evaluating the argument 'x' in selecting a method for function 'mean': Error in .Call("CGetType", x@address) : "CGetType" not resolved from current namespace (biganalytics) Calls: colmean -> colmean -> .Call Calls: mean -> mean -> mean Execution halted