* using log directory 'd:/Rcompile/CRANpkg/local/3.0/WGCNA.Rcheck' * using R version 3.0.3 (2014-03-06) * using platform: i386-w64-mingw32 (32-bit) * using session charset: ISO8859-1 * checking for file 'WGCNA/DESCRIPTION' ... OK * this is package 'WGCNA' version '1.46' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'WGCNA' can be installed ... ERROR Installation failed. The installation logfile: * installing *source* package 'WGCNA' ... ** package 'WGCNA' successfully unpacked and MD5 sums checked ** libs *** arch - i386 make[1]: Entering directory `/cygdrive/d/temp/RtmpuudGV1/R.INSTALL2cc834517c6e/WGCNA/src-i386' g++ -I"D:/Rcompile/recent/R-3.0.3/include" -I"d:/Rcompile/CRANpkg/extralibs215/local215/include" -O3 -Wall -mtune=core2 -c bucketApproxSort.cc -o bucketApproxSort.o bucketApproxSort.cc: In function 'SEXPREC* bucketOrder_R(SEXP, SEXP, SEXP, SEXP, SEXP)': bucketApproxSort.cc:80:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] gcc -I"D:/Rcompile/recent/R-3.0.3/include" -I"d:/Rcompile/CRANpkg/extralibs215/local215/include" -O3 -Wall -std=gnu99 -mtune=core2 -c corFunctions-common.c -o corFunctions-common.o gcc -I"D:/Rcompile/recent/R-3.0.3/include" -I"d:/Rcompile/CRANpkg/extralibs215/local215/include" -O3 -Wall -std=gnu99 -mtune=core2 -c corFunctions-unified.c -o corFunctions-unified.o gcc -I"D:/Rcompile/recent/R-3.0.3/include" -I"d:/Rcompile/CRANpkg/extralibs215/local215/include" -O3 -Wall -std=gnu99 -mtune=core2 -c networkFunctions.c -o networkFunctions.o gcc -I"D:/Rcompile/recent/R-3.0.3/include" -I"d:/Rcompile/CRANpkg/extralibs215/local215/include" -O3 -Wall -std=gnu99 -mtune=core2 -c pivot.c -o pivot.o g++ -I"D:/Rcompile/recent/R-3.0.3/include" -I"d:/Rcompile/CRANpkg/extralibs215/local215/include" -O3 -Wall -mtune=core2 -c quantileC.cc -o quantileC.o g++ -shared -s -static-libgcc -o WGCNA.dll tmp.def bucketApproxSort.o corFunctions-common.o corFunctions-unified.o networkFunctions.o pivot.o quantileC.o -lRblas -Ld:/Rcompile/CRANpkg/extralibs215/local215/lib/i386 -Ld:/Rcompile/CRANpkg/extralibs215/local215/lib -LD:/Rcompile/recent/R-3.0.3/bin/i386 -lR make[1]: Leaving directory `/cygdrive/d/temp/RtmpuudGV1/R.INSTALL2cc834517c6e/WGCNA/src-i386' make[1]: Entering directory `/cygdrive/d/temp/RtmpuudGV1/R.INSTALL2cc834517c6e/WGCNA/src-i386' make[1]: Leaving directory `/cygdrive/d/temp/RtmpuudGV1/R.INSTALL2cc834517c6e/WGCNA/src-i386' installing to d:/Rcompile/CRANpkg/lib/3.0/WGCNA/libs/i386 *** arch - x64 make[1]: Entering directory `/cygdrive/d/temp/RtmpuudGV1/R.INSTALL2cc834517c6e/WGCNA/src-x64' g++ -m64 -I"D:/Rcompile/recent/R-3.0.3/include" -I"d:/Rcompile/CRANpkg/extralibs215/local215/include" -O3 -Wall -mtune=core2 -c bucketApproxSort.cc -o bucketApproxSort.o bucketApproxSort.cc: In function 'SEXPREC* bucketOrder_R(SEXP, SEXP, SEXP, SEXP, SEXP)': bucketApproxSort.cc:80:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] gcc -m64 -I"D:/Rcompile/recent/R-3.0.3/include" -I"d:/Rcompile/CRANpkg/extralibs215/local215/include" -O2 -Wall -std=gnu99 -mtune=core2 -c corFunctions-common.c -o corFunctions-common.o gcc -m64 -I"D:/Rcompile/recent/R-3.0.3/include" -I"d:/Rcompile/CRANpkg/extralibs215/local215/include" -O2 -Wall -std=gnu99 -mtune=core2 -c corFunctions-unified.c -o corFunctions-unified.o gcc -m64 -I"D:/Rcompile/recent/R-3.0.3/include" -I"d:/Rcompile/CRANpkg/extralibs215/local215/include" -O2 -Wall -std=gnu99 -mtune=core2 -c networkFunctions.c -o networkFunctions.o gcc -m64 -I"D:/Rcompile/recent/R-3.0.3/include" -I"d:/Rcompile/CRANpkg/extralibs215/local215/include" -O2 -Wall -std=gnu99 -mtune=core2 -c pivot.c -o pivot.o g++ -m64 -I"D:/Rcompile/recent/R-3.0.3/include" -I"d:/Rcompile/CRANpkg/extralibs215/local215/include" -O3 -Wall -mtune=core2 -c quantileC.cc -o quantileC.o g++ -m64 -shared -s -static-libgcc -o WGCNA.dll tmp.def bucketApproxSort.o corFunctions-common.o corFunctions-unified.o networkFunctions.o pivot.o quantileC.o -lRblas -Ld:/Rcompile/CRANpkg/extralibs215/local215/lib/x64 -Ld:/Rcompile/CRANpkg/extralibs215/local215/lib -LD:/Rcompile/recent/R-3.0.3/bin/x64 -lR make[1]: Leaving directory `/cygdrive/d/temp/RtmpuudGV1/R.INSTALL2cc834517c6e/WGCNA/src-x64' make[1]: Entering directory `/cygdrive/d/temp/RtmpuudGV1/R.INSTALL2cc834517c6e/WGCNA/src-x64' make[1]: Leaving directory `/cygdrive/d/temp/RtmpuudGV1/R.INSTALL2cc834517c6e/WGCNA/src-x64' installing to d:/Rcompile/CRANpkg/lib/3.0/WGCNA/libs/x64 ** R ** data ** inst ** preparing package for lazy loading Error : .onLoad failed in loadNamespace() for 'GO.db', details: call: match.arg(synchronous, c("off", "normal", "full")) error: 'arg' must be NULL or a character vector ERROR: lazy loading failed for package 'WGCNA' * removing 'd:/Rcompile/CRANpkg/lib/3.0/WGCNA' * restoring previous 'd:/Rcompile/CRANpkg/lib/3.0/WGCNA'