* using log directory 'd:/Rcompile/CRANpkg/local/3.0/MASS.Rcheck'
* using R version 3.0.3 (2014-03-06)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* checking for file 'MASS/DESCRIPTION' ... OK
* this is package 'MASS' version '7.3-37'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'MASS' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking compiled code ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** checking differences from 'MASS-Ex_i386.Rout' to 'MASS-Ex.Rout.save' ...
870c870
< -2.42080779 -0.61510520 -0.03573836  0.81641138  2.15153498 
---
> -2.42080780 -0.61510520 -0.03573836  0.81641138  2.15153499 
1528c1528
< factor(subject)2  -3.021e-15  2.828e-01   0.000 1.000000    
---
> factor(subject)2  -2.300e-15  2.828e-01   0.000 1.000000    
2200c2200
< > ## End Don't show
---
> > ## End(Don't show)
2336c2336
< > ## End Don't show
---
> > ## End(Don't show)
2378c2378
< ContHigh                          -2.159e-16  1.690e-01   0.000 1.000000    
---
> ContHigh                          -1.490e-15  1.690e-01   0.000 1.000000    
3203c3203
<  -3.631e+01    7.292e-01    4.167e-01    6.030e-18  
---
>  -3.631e+01    7.292e-01    4.167e-01   -8.131e-17  
3366c3366
<    0.07776401    3.08304824    3.30137838    3.44562531    2.80464433 
---
>    0.07776401    3.08304824    3.30137838    3.44562531    2.80464434 
3368c3368
<    2.60835015    3.03357724    3.52301734    3.38711844    3.46709395 
---
>    2.60835015    3.03357725    3.52301734    3.38711844    3.46709396 
3370c3370
<    3.81438456    3.73878664    3.51332580    3.39741114    3.47088607 
---
>    3.81438456    3.73878664    3.51332581    3.39741115    3.47088608 
3372c3372
<    3.72895847    3.31863862    3.37938672    2.96452195    3.58468686 
---
>    3.72895847    3.31863862    3.37938673    2.96452195    3.58468686 
3374c3374
<    3.39628029    3.36998871   -2.96015461 
---
>    3.39628029    3.36998872   -2.96015460 
3397c3397
< Achieved convergence tolerance: 4.889e-06
---
> Achieved convergence tolerance: 4.923e-06
3513c3513
< > ## End Don't show
---
> > ## End(Don't show)
3533c3533
< (Intercept) 2.78706 (Intr)
---
> (Intercept) 2.78707 (Intr)
3561c3561
< > ## End Don't show
---
> > ## End(Don't show)
3602c3602
< N:K          1   33.1   33.13   2.146 0.16865   
---
> N:K          1   33.1   33.14   2.146 0.16865   
3661c3661
< 54.02 57.45 60.77 50.12 50.52 56.35 
---
> 54.03 57.45 60.77 50.12 50.52 56.35 
3709c3709
< Nf         3  20020    6674  37.686 2.46e-12 ***
---
> Nf         3  20020    6673  37.686 2.46e-12 ***
3727c3727
< Nf           3  20020    6674  37.686 2.46e-12 ***
---
> Nf           3  20020    6673  37.686 2.46e-12 ***
3761c3761
<      104.50      109.79       97.62 
---
>      104.50      109.79       97.63 
5132c5132
< Achieved convergence tolerance: 4.354e-06
---
> Achieved convergence tolerance: 4.324e-06
Warning message:
running command 'diff -bw "D:\temp\RtmpOeQiKB\Rdiffa32e85dd34624" "D:\temp\RtmpOeQiKB\Rdiffb32e81af471cf"' had status 1 
 OK
** running examples for arch 'x64' ... OK
** checking differences from 'MASS-Ex_x64.Rout' to 'MASS-Ex.Rout.save' ...
2200c2200
< > ## End Don't show
---
> > ## End(Don't show)
2336c2336
< > ## End Don't show
---
> > ## End(Don't show)
3366c3366
<    0.07776401    3.08304824    3.30137838    3.44562531    2.80464433 
---
>    0.07776401    3.08304824    3.30137838    3.44562531    2.80464434 
3368c3368
<    2.60835015    3.03357724    3.52301734    3.38711844    3.46709395 
---
>    2.60835015    3.03357725    3.52301734    3.38711844    3.46709396 
3374c3374
<    3.39628029    3.36998871   -2.96015460 
---
>    3.39628029    3.36998872   -2.96015460 
3397c3397
< Achieved convergence tolerance: 4.92e-06
---
> Achieved convergence tolerance: 4.923e-06
3513c3513
< > ## End Don't show
---
> > ## End(Don't show)
3561c3561
< > ## End Don't show
---
> > ## End(Don't show)
Warning message:
running command 'diff -bw "D:\temp\Rtmpm86qea\Rdiffa2a3c104c3a79" "D:\temp\Rtmpm86qea\Rdiffb2a3c2ed4012"' had status 1 
 OK
* checking for unstated dependencies in tests ... OK
* checking tests ...
** running tests for arch 'i386' OK
  Running 'confint.R'
  Running 'fitdistr.R'
  Comparing 'fitdistr.Rout' to 'fitdistr.Rout.save' ... OK
  Running 'glm.nb.R'
  Running 'hubers.R'
  Running 'lme.R'
  Running 'polr.R'
  Running 'profile.R'
  Running 'regression.R'
  Comparing 'regression.Rout' to 'regression.Rout.save' ... OK
  Running 'rlm.R'
  Running 'scripts.R'
** running tests for arch 'x64' OK
  Running 'confint.R'
  Running 'fitdistr.R'
  Comparing 'fitdistr.Rout' to 'fitdistr.Rout.save' ... OK
  Running 'glm.nb.R'
  Running 'hubers.R'
  Running 'lme.R'
  Running 'polr.R'
  Running 'profile.R'
  Running 'regression.R'
  Comparing 'regression.Rout' to 'regression.Rout.save' ... OK
  Running 'rlm.R'
  Running 'scripts.R'
* checking PDF version of manual ... OK