* using log directory 'd:/Rcompile/CRANpkg/local/2.12/timeordered.Rcheck' * using R version 2.12.2 (2011-02-25) * using platform: i386-pc-mingw32 (32-bit) * using session charset: ISO8859-1 * checking for file 'timeordered/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'timeordered' version '0.9' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'timeordered' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking whether the name space can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE generatetimeaggregatednetwork: no visible binding for global variable 'Time' shortesthoppath: no visible binding for global variable 'Name' shortesthoppath: no visible binding for global variable 'Time' shortesttimepath: no visible binding for global variable 'Name' shortesttimepath: no visible binding for global variable 'Time' spreadanalysis: no visible binding for global variable 'Time' * checking Rd files ... NOTE prepare_Rd: applynetworkfunction.Rd:22-24: Dropping empty section \details prepare_Rd: applynetworkfunction.Rd:32-34: Dropping empty section \note prepare_Rd: applynetworkfunction.Rd:28-30: Dropping empty section \references prepare_Rd: generatelatencies.Rd:22-24: Dropping empty section \details prepare_Rd: generatelatencies.Rd:38-40: Dropping empty section \seealso prepare_Rd: generatenetworkslices.Rd:22-24: Dropping empty section \details prepare_Rd: generatenetworkslices.Rd:32-34: Dropping empty section \note prepare_Rd: generatenetworkslices.Rd:28-30: Dropping empty section \references prepare_Rd: generatetimeaggregatednetwork.Rd:25-27: Dropping empty section \details prepare_Rd: generatetimeaggregatednetwork.Rd:35-37: Dropping empty section \note prepare_Rd: generatetimeaggregatednetwork.Rd:31-33: Dropping empty section \references prepare_Rd: generatetimedeltas.Rd:25-27: Dropping empty section \details prepare_Rd: generatetimedeltas.Rd:35-37: Dropping empty section \note prepare_Rd: generatetimedeltas.Rd:31-33: Dropping empty section \references prepare_Rd: generatetimelags.Rd:25-27: Dropping empty section \details prepare_Rd: generatetimelags.Rd:36-38: Dropping empty section \note prepare_Rd: generatetimelags.Rd:32-34: Dropping empty section \references prepare_Rd: generatetonetwork.Rd:22-24: Dropping empty section \details prepare_Rd: generatetonetwork.Rd:32-34: Dropping empty section \note prepare_Rd: generatetonetwork.Rd:38-40: Dropping empty section \seealso prepare_Rd: generatetonetworkfromvel.Rd:19-21: Dropping empty section \details prepare_Rd: generatetonetworkfromvel.Rd:22-28: Dropping empty section \value prepare_Rd: generatetonetworkfromvel.Rd:33-35: Dropping empty section \note prepare_Rd: generatetonetworkfromvel.Rd:29-31: Dropping empty section \references prepare_Rd: generatetonetworkfromvel.Rd:39-41: Dropping empty section \seealso prepare_Rd: generatevertexedgelist.Rd:22-24: Dropping empty section \details prepare_Rd: generatevertexedgelist.Rd:25-31: Dropping empty section \value prepare_Rd: generatevertexedgelist.Rd:36-38: Dropping empty section \note prepare_Rd: generatevertexedgelist.Rd:32-34: Dropping empty section \references prepare_Rd: generatevertexedgelist.Rd:42-44: Dropping empty section \seealso prepare_Rd: maxpoints.Rd:19-21: Dropping empty section \details prepare_Rd: maxpoints.Rd:29-31: Dropping empty section \note prepare_Rd: maxpoints.Rd:25-27: Dropping empty section \references prepare_Rd: midpoints.Rd:19-21: Dropping empty section \details prepare_Rd: midpoints.Rd:29-31: Dropping empty section \note prepare_Rd: midpoints.Rd:25-27: Dropping empty section \references prepare_Rd: plotnetworkslices.Rd:22-24: Dropping empty section \details prepare_Rd: plotnetworkslices.Rd:32-34: Dropping empty section \note prepare_Rd: plotnetworkslices.Rd:28-30: Dropping empty section \references prepare_Rd: plottanet.Rd:37-39: Dropping empty section \details prepare_Rd: plottanet.Rd:47-49: Dropping empty section \note prepare_Rd: plottanet.Rd:43-45: Dropping empty section \references prepare_Rd: plottonet.Rd:49-51: Dropping empty section \details prepare_Rd: plottonet.Rd:59-61: Dropping empty section \note prepare_Rd: plottonet.Rd:55-57: Dropping empty section \references prepare_Rd: randomizeidentities.Rd:28-30: Dropping empty section \details prepare_Rd: randomizeidentities.Rd:38-40: Dropping empty section \note prepare_Rd: randomizeidentities.Rd:34-36: Dropping empty section \references prepare_Rd: randomizetimes.Rd:28-30: Dropping empty section \details prepare_Rd: randomizetimes.Rd:38-40: Dropping empty section \note prepare_Rd: randomizetimes.Rd:34-36: Dropping empty section \references prepare_Rd: rarefy.Rd:22-24: Dropping empty section \details prepare_Rd: rarefy.Rd:32-34: Dropping empty section \note prepare_Rd: rarefy.Rd:28-30: Dropping empty section \references prepare_Rd: shortesthoppath.Rd:31-33: Dropping empty section \details prepare_Rd: shortesthoppath.Rd:37-39: Dropping empty section \references prepare_Rd: shortesttimepath.Rd:29-31: Dropping empty section \details prepare_Rd: shortesttimepath.Rd:36-38: Dropping empty section \references prepare_Rd: spreadanalysis.Rd:25-27: Dropping empty section \details prepare_Rd: spreadanalysis.Rd:31-33: Dropping empty section \references prepare_Rd: transformspreadbyindividual.Rd:19-21: Dropping empty section \details prepare_Rd: transformspreadbyindividual.Rd:29-31: Dropping empty section \note prepare_Rd: transformspreadbyindividual.Rd:25-27: Dropping empty section \references * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking data for non-ASCII characters ... OK * checking examples ... OK * checking PDF version of manual ... OK