* using log directory 'd:/Rcompile/CRANpkg/local/2.12/rangeMapper.Rcheck' * using R version 2.12.2 (2011-02-25) * using platform: i386-pc-mingw32 (32-bit) * using session charset: ISO8859-1 * checking for file 'rangeMapper/DESCRIPTION' ... OK * this is package 'rangeMapper' version '0.0-6' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'rangeMapper' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking whether the name space can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE .X.chooseFunction: no visible binding for global variable '.RangeMapper' .X.chooseSubset: no visible binding for global variable '.RangeMapper' .X.chooseSubset : OnOK: no visible binding for '<<-' assignment to 'Out' .X.chooseSubset: no visible binding for global variable 'Out' .X.chooseVariable: no visible binding for global variable '.RangeMapper' .X.close: no visible binding for global variable '.RangeMapper' .X.exists: no visible binding for global variable '.RangeMapper' .X.get: no visible binding for global variable '.RangeMapper' .X.put: no visible binding for global variable '.RangeMapper' .X.rangeMap.rm: no visible binding for global variable 'out' .X.tkColorPalette: no visible binding for global variable '.RangeMapper' .X.tkComboEntryBox: no visible binding for global variable '.RangeMapper' .X.tkdbBrowse.active.proj: no visible binding for global variable 'out' bio.merge: no visible binding for global variable 'dbcon' bio.merge : : no visible binding for global variable 'dbcon' rangeMap.export: no visible binding for global variable 'CON' tkMakeColorPalette: no visible binding for '<<-' assignment to 'out' tkMakeColorPalette : PickColor: no visible binding for '<<-' assignment to 'out' tkMakeColorPalette : PickColor: no visible binding for global variable 'out' tkMakeColorPalette : onOK: no visible binding for global variable 'out' tkMakeColorPalette : onOK: no visible binding for '<<-' assignment to 'out' tkMakeColorPalette: no visible binding for global variable 'out' * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking data for non-ASCII characters ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * checking PDF version of manual ... OK