* using log directory 'd:/Rcompile/CRANpkg/local/2.12/fpc.Rcheck'
* using R version 2.12.2 (2011-02-25)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* checking for file 'fpc/DESCRIPTION' ... OK
* this is package 'fpc' version '2.0-3'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'fpc' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking differences from 'fpc-Ex.Rout' to 'fpc-Ex.Rout.save' ...
751c751
<    0.44 
---
>   0.686 
754c754
<    0.22 
---
>   0.412 
758c758
<    0.56 
---
>   0.736 
896,898c896,898
< [1,]  0.84359426 1.14608710 -0.02209846
< [2,] -0.33649001 0.27903245 -0.01187219
< [3,] -0.06808816 0.03965075  1.00303099
---
> [1,]  0.84359426 1.14608710  0.02209846
> [2,] -0.33649001 0.27903245  0.01187219
> [3,] -0.06808816 0.03965075 -1.00303099
901,903c901,903
< [1,] -0.07433352 -1.420772600  0.039179197
< [2,] -0.43725296 -0.002745807 -0.005281343
< [3,] -0.03831248 -0.001676168 -1.005389819
---
> [1,] -0.07433352 1.420772600  0.039179197
> [2,] -0.43725296 0.002745807 -0.005281343
> [3,] -0.03831248 0.001676168 -1.005389819
1098,1101c1098,1101
< Sepal.Length    0.7730041 -0.09914374   0.61019653 -0.14246157
< Sepal.Width     0.4418583  0.79204432  -0.41671437  0.06145083
< Petal.Length   -0.4416270  0.59416223   0.66969662  0.05867974
< Petal.Width    -0.1104150  0.09903318  -0.07426825 -0.98614663
---
> Sepal.Length    0.7730041 -0.09914374    0.6101968 -0.14246043
> Sepal.Width     0.4418583  0.79204432   -0.4167145  0.06145005
> Petal.Length   -0.4416270  0.59416223    0.6696965  0.05868099
> Petal.Width    -0.1104150  0.09903318   -0.0742664 -0.98614677
1355c1355
< Nonoptimal or repeated fit found in run  2 
---
> k=  2  new best fit found in run  2 
1359c1359
< k=  3  BIC=  1292.826 
---
> k=  3  BIC=  1300.073 
1370,1371c1370,1371
< Comp.1 0.506   48    100  0.48
< Comp.2 0.494   52    100  0.52
---
> Comp.1 0.527   51    100  0.51
> Comp.2 0.473   49    100  0.49
1378,1379c1378,1379
<  [38] 2 2 1 2 1 1 2 2 1 1 2 2 2 1 2 1 1 2 2 1 2 2 2 1 2 1 1 2 1 1 2 2 2 1 2 2 1
<  [75] 1 1 1 2 2 1 2 1 1 1 1 2 2 1 2 1 1 2 1 2 2 2 2 2 2 2
---
>  [38] 2 2 1 2 1 1 2 2 1 1 2 1 2 1 2 1 1 2 2 1 2 2 2 1 2 1 1 2 1 1 2 2 1 1 2 2 1
>  [75] 1 1 1 2 2 1 2 1 1 1 1 2 1 1 2 1 1 2 1 2 2 2 2 2 2 2
1384c1384
< [1] -0.06786994 -0.54104769
---
> [1] -0.06364726 -0.51088660
1388,1389c1388,1389
< [1,] 1.130520 0.000000
< [2,] 0.000000 1.091476
---
> [1,] 1.122126 0.000000
> [2,] 0.000000 1.096735
1393c1393
< [1] 0.27877309 0.22952064 0.14780796 0.30344389 0.04045442
---
> [1] 0.27279622 0.22617675 0.15713052 0.29791908 0.04597742
1396c1396
< [1] 0.1441872 0.1676908 0.5133395 0.1747825
---
> [1] 0.1490151 0.1719611 0.5061025 0.1729213
1404c1404
< [1] 0.2365028 0.4120134
---
> [1] 0.2462103 0.4234742
1408,1409c1408,1409
< [1,] 0.6873457 0.0000000
< [2,] 0.0000000 0.8517165
---
> [1,] 0.6738187 0.0000000
> [2,] 0.0000000 0.8547246
1413c1413
< [1] 0.09927107 0.16982896 0.27356225 0.05383639 0.40350133
---
> [1] 0.09744369 0.17073751 0.26910177 0.04818053 0.41453650
1416c1416
< [1] 0.27726281 0.41500389 0.06173992 0.24599338
---
> [1] 0.2781738 0.4219535 0.0484232 0.2514495
2301c2301
< [1,]  0.066419771  0.036305431 -0.038563657 -0.009616087
---
> [1,]  0.066419771  0.036305431 -0.038563657 -0.009616086
2304c2304
< [4,] -0.009616087 -0.004044032  0.006369898  0.001595522
---
> [4,] -0.009616086 -0.004044032  0.006369898  0.001595522
2339c2339
< 88   0.000000e+00 4.082716e-80
---
> 88   0.000000e+00 4.085183e-80
 OK
* checking for unstated dependencies in tests ... OK
* checking tests ... OK
* checking PDF version of manual ... OK