* using log directory 'd:/Rcompile/CRANpkg/local/2.12/detrendeR.Rcheck' * using R version 2.12.2 (2011-02-25) * using platform: i386-pc-mingw32 (32-bit) * using session charset: ISO8859-1 * checking for file 'detrendeR/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'detrendeR' version '1.0.1' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'detrendeR' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking whether the name space can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE .optionsDefault: no visible binding for global variable 'method1' .optionsDefault: no visible binding for global variable 'n1' .optionsDefault: no visible binding for global variable 'nPerc1' .optionsDefault: no visible binding for global variable 'p1' .optionsDefault: no visible binding for global variable 'method2' .optionsDefault: no visible binding for global variable 'n2' .optionsDefault: no visible binding for global variable 'nPerc2' .optionsDefault: no visible binding for global variable 'p2' CRONO: no visible binding for global variable 'arMAX' CRONO: no visible binding for global variable '.heigth' CRONO: no visible binding for global variable 'makeAr' CRONO: no visible binding for global variable 'biweightMean' DetrendeR : <anonymous>: no visible binding for global variable 'DataBaseChoice' DetrendeR : <anonymous>: no visible binding for global variable 'TempDataBase' DetrendeR : <anonymous>: no visible binding for global variable 'fname' DetrendeR : foo: no visible binding for global variable 'DataBaseChoice' DetrendeR : DELETE_DATASET: no visible binding for global variable 'DataBaseChoice' DetrendeR : SERIES_INFORMATION: no visible binding for global variable 'DataBaseChoice' DetrendeR : TREE_IDS: no visible binding for global variable 'DataBaseChoice' DetrendeR : TREE_IDS: no visible binding for global variable 'stc' DetrendeR : MISSING_RINGS: no visible binding for global variable 'DataBaseChoice' DetrendeR : RWL_INFO: no visible binding for global variable 'DataBaseChoice' DetrendeR : SEG_PLOT: no visible binding for global variable 'DataBaseChoice' DetrendeR : RWL_PLOT: no visible binding for global variable 'DataBaseChoice' DetrendeR : AR.MODEL: no visible binding for global variable 'DataBaseChoice' DetrendeR : makeCRONO: no visible binding for global variable 'DataBaseChoice' DetrendeR : EPS: no visible binding for global variable 'DataBaseChoice' Detrender.Options: no visible binding for global variable 'makeSegPlot' Detrender.Options: no visible binding for global variable 'remove.shorter.series' Detrender.Options: no visible binding for global variable 'delete.shorter.series' Detrender.Options: no visible binding for global variable 'makeFirstDetrending' Detrender.Options: no visible binding for global variable 'save.detrend1' Detrender.Options: no visible binding for global variable 'method1' Detrender.Options: no visible binding for global variable 'n1' Detrender.Options: no visible binding for global variable 'nPerc1' Detrender.Options: no visible binding for global variable 'p1' Detrender.Options: no visible binding for global variable 'makeSecondDetrending' Detrender.Options: no visible binding for global variable 'save.detrend2' Detrender.Options: no visible binding for global variable 'method2' Detrender.Options: no visible binding for global variable 'n2' Detrender.Options: no visible binding for global variable 'nPerc2' Detrender.Options: no visible binding for global variable 'p2' Detrender.Options: no visible binding for global variable 'arMAX' Detrender.Options: no visible binding for global variable 'makeAr' Detrender.Options: no visible binding for global variable 'run.win.analysis' Detrender.Options: no visible binding for global variable 'make.common.EPS' Detrender.Options: no visible binding for global variable 'make.select.period.EPS' Detrender.Options: no visible binding for global variable 'first.year.common' Detrender.Options: no visible binding for global variable 'last.year.common' Detrender.Options: no visible binding for global variable 'winLength' Detrender.Options: no visible binding for global variable 'stepWin' InteractiveDetrending : draw: no visible binding for global variable 'currentBANDWIDTH' InteractiveDetrending : draw: no visible binding for global variable 'currentBANDWIDTH.P' InteractiveDetrending : draw: no visible binding for global variable 'currentP' InteractiveDetrending : re.draw: no visible binding for global variable 'currentBANDWIDTH' InteractiveDetrending : re.draw: no visible binding for global variable 'currentBANDWIDTH.P' InteractiveDetrending : re.draw: no visible binding for global variable 'currentP' arMODEL: no visible binding for global variable 'arMAX' arMODEL: no visible binding for global variable '.heigth' arMODEL: no visible binding for global variable 'makeAr' arstan: no visible binding for global variable 'stc' arstan: no visible binding for global variable 'makeSegPlot' arstan: no visible binding for global variable 'remove.shorter.series' arstan: no visible binding for global variable 'delete.shorter.series' arstan: no visible binding for global variable 'makeFirstDetrending' arstan: no visible binding for global variable 'first.detrending.method' arstan: no visible binding for global variable 'method1' arstan: no visible binding for global variable 'nPerc1' arstan: no visible binding for global variable 'n1' arstan: no visible binding for global variable 'p1' arstan: no visible binding for global variable 'save.detrend1' arstan: no visible binding for global variable 'interactive.detrend' arstan: no visible binding for global variable 'makeSecondDetrending' arstan: no visible binding for global variable 'second.detrending.method' arstan: no visible binding for global variable 'method2' arstan: no visible binding for global variable 'nPerc2' arstan: no visible binding for global variable 'n2' arstan: no visible binding for global variable 'p2' arstan: no visible binding for global variable 'save.detrend2' arstan: no visible binding for global variable 'run.win.analysis' arstan: no visible binding for global variable 'winLength' arstan: no visible binding for global variable 'stepWin' arstan: no visible binding for global variable 'make.common.EPS' arstan: no visible binding for global variable 'make.select.period.EPS' arstan: no visible binding for global variable 'first.year.common' arstan: no visible binding for global variable 'last.year.common' arstan: no visible binding for global variable 'makeAr' arstan: no visible binding for global variable 'arMAX' detrenderGUI: no visible binding for global variable 'stc' detrenderGUI: no visible binding for global variable 'remove.shorter.series' detrenderGUI: no visible binding for global variable 'delete.shorter.series' detrenderGUI: no visible binding for global variable 'makeSegPlot' detrenderGUI: no visible binding for global variable 'interactive.detrend' detrenderGUI: no visible binding for global variable 'method1' detrenderGUI: no visible binding for global variable 'method2' detrenderGUI: no visible binding for global variable 'n1' detrenderGUI: no visible binding for global variable 'nPerc1' detrenderGUI: no visible binding for global variable 'p1' detrenderGUI: no visible binding for global variable 'n2' detrenderGUI: no visible binding for global variable 'nPerc2' detrenderGUI: no visible binding for global variable 'p2' detrenderGUI: no visible binding for global variable 'makeAr' detrenderGUI: no visible binding for global variable 'arMAX' detrenderGUI: no visible binding for global variable 'biweightMean' detrenderGUI: no visible binding for global variable 'run.win.analysis' detrenderGUI: no visible binding for global variable 'winLength' detrenderGUI: no visible binding for global variable 'stepWin' detrenderGUI: no visible binding for global variable 'make.common.EPS' detrenderGUI: no visible binding for global variable 'make.select.period.EPS' detrenderGUI: no visible binding for global variable 'first.year.common' detrenderGUI: no visible binding for global variable 'last.year.common' detrenderGUI : OnOk: no visible binding for global variable 'method1' detrenderGUI : OnOk: no visible binding for global variable 'n1' detrenderGUI : OnOk: no visible binding for global variable 'nPerc1' detrenderGUI : OnOk: no visible binding for global variable 'p1' detrenderGUI : OnOk: no visible binding for global variable 'method2' detrenderGUI : OnOk: no visible binding for global variable 'n2' detrenderGUI : OnOk: no visible binding for global variable 'nPerc2' detrenderGUI : OnOk: no visible binding for global variable 'p2' detrenderGUI : OnOk: no visible binding for global variable 'make.select.period.EPS' detrenderGUI : OnOk: no visible binding for global variable 'first.year.common' detrenderGUI : OnOk: no visible binding for global variable 'last.year.common' detrending: no visible binding for global variable '.heigth' detrending: no visible binding for global variable 'method1' detrending: no visible binding for global variable 'method2' detrending: no visible binding for global variable 'n1' detrending: no visible binding for global variable 'nPerc1' detrending: no visible binding for global variable 'p1' detrending: no visible binding for global variable 'n2' detrending: no visible binding for global variable 'nPerc2' detrending: no visible binding for global variable 'p2' detrending : OnOk: no visible binding for '<<-' assignment to 'makeFirstDetrending' detrending : OnOk: no visible binding for '<<-' assignment to 'method1' detrending : OnOk: no visible binding for '<<-' assignment to 'n1' detrending : OnOk: no visible binding for '<<-' assignment to 'nPerc1' detrending : OnOk: no visible binding for '<<-' assignment to 'p1' detrending : OnOk: no visible binding for '<<-' assignment to 'first.detrending.method' detrending : OnOk: no visible binding for global variable 'method1' detrending : OnOk: no visible binding for global variable 'n1' detrending : OnOk: no visible binding for global variable 'nPerc1' detrending : OnOk: no visible binding for global variable 'p1' detrending : OnOk: no visible binding for '<<-' assignment to 'makeSecondDetrending' detrending : OnOk: no visible binding for '<<-' assignment to 'method2' detrending : OnOk: no visible binding for '<<-' assignment to 'n2' detrending : OnOk: no visible binding for '<<-' assignment to 'nPerc2' detrending : OnOk: no visible binding for '<<-' assignment to 'p2' detrending : OnOk: no visible binding for '<<-' assignment to 'second.detrending.method' detrending : OnOk: no visible binding for global variable 'method2' detrending : OnOk: no visible binding for global variable 'n2' detrending : OnOk: no visible binding for global variable 'nPerc2' detrending : OnOk: no visible binding for global variable 'p2' detrending : OnOk: no visible binding for '<<-' assignment to 'interactive.detrend' detrending: no visible binding for global variable 'interactive.detrend' interactiveDETRENDING: no visible binding for global variable 'makeFirstDetrending' interactiveDETRENDING: no visible binding for global variable 'first.detrending.method' interactiveDETRENDING: no visible binding for global variable 'interactive.detrend' interactiveDETRENDING: no visible binding for global variable 'second.detrending.method' interactiveEPS: no visible binding for global variable '.heigth' interactiveEPS: no visible binding for global variable 'run.win.analysis' interactiveEPS: no visible binding for global variable 'winLength' interactiveEPS: no visible binding for global variable 'stepWin' interactiveEPS: no visible binding for global variable 'make.common.EPS' interactiveEPS: no visible binding for global variable 'make.select.period.EPS' interactiveEPS: no visible binding for global variable 'first.year.common' interactiveEPS: no visible binding for global variable 'last.year.common' interactiveEPS : OnOk: no visible binding for '<<-' assignment to 'winLength' interactiveEPS : OnOk: no visible binding for '<<-' assignment to 'run.win.analysis' interactiveEPS : OnOk: no visible binding for '<<-' assignment to 'stepWin' interactiveEPS : OnOk: no visible binding for '<<-' assignment to 'make.common.EPS' interactiveEPS : OnOk: no visible binding for '<<-' assignment to 'make.select.period.EPS' interactiveEPS : OnOk: no visible binding for '<<-' assignment to 'first.year.common' interactiveEPS : OnOk: no visible binding for '<<-' assignment to 'last.year.common' interactiveEPS : OnOk: no visible binding for global variable 'run.win.analysis' interactiveEPS : OnOk: no visible binding for global variable 'winLength' interactiveEPS : OnOk: no visible binding for global variable 'stepWin' interactiveEPS : OnOk: no visible binding for global variable 'first.year.common' interactiveEPS : OnOk: no visible binding for global variable 'last.year.common' readCompact: no visible binding for global variable '.heigth' readCrnFile: no visible binding for global variable '.heigth' readRwlFile: no visible binding for global variable '.heigth' readTable: no visible binding for global variable '.heigth' * checking Rd files ... NOTE prepare_Rd: EPS.value.Rd:20-22: Dropping empty section \details prepare_Rd: EPS.value.Rd:57-59: Dropping empty section \note prepare_Rd: EPS.value.Rd:54-56: Dropping empty section \author prepare_Rd: EPS.value.Rd:63-65: Dropping empty section \seealso prepare_Rd: RwlInfo.Rd:20-22: Dropping empty section \details prepare_Rd: RwlInfo.Rd:38-40: Dropping empty section \note prepare_Rd: RwlInfo.Rd:35-37: Dropping empty section \author prepare_Rd: RwlInfo.Rd:32-34: Dropping empty section \references prepare_Rd: RwlInfo.Rd:44-46: Dropping empty section \seealso prepare_Rd: detrendeR-package.Rd:36-38: Dropping empty section \seealso prepare_Rd: detrender.Rd:51-57: Dropping empty section \value prepare_Rd: detrender.Rd:72-74: Dropping empty section \note prepare_Rd: detrender.Rd:69-71: Dropping empty section \author prepare_Rd: detrender.Rd:78-80: Dropping empty section \seealso * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... OK * checking PDF version of manual ... OK