* using log directory 'd:/Rcompile/CRANpkg/local/2.12/RecordLinkage.Rcheck' * using R version 2.12.2 (2011-02-25) * using platform: i386-pc-mingw32 (32-bit) * using session charset: ISO8859-1 * checking for file 'RecordLinkage/DESCRIPTION' ... OK * this is package 'RecordLinkage' version '0.3-5' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'RecordLinkage' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the name space can be loaded with stated dependencies ... OK ** checking whether the name space can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the name space can be loaded with stated dependencies ... OK ** checking whether the name space can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE getMinimalTrain: no visible binding for global variable 'ID' optimalThreshold: no visible binding for global variable 'is_match' optimalThreshold: no visible binding for global variable 'Wdata' * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... WARNING Bad \usage lines found in documentation object '%append%-methods': S4method{%append%}{RecLinkData,RecLinkData}(x, y) S4method{%append%}{RecLinkResult,RecLinkResult}(x, y) Functions with \usage entries need to have the appropriate \alias entries, and all their arguments documented. The \usage entries must correspond to syntactically valid R code. See the chapter 'Writing R documentation files' in manual 'Writing R Extensions'. * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking data for non-ASCII characters ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking examples ... ** running examples for arch 'i386' ... OK ** running examples for arch 'x64' ... OK * checking package vignettes in 'inst/doc' ... OK * checking PDF version of manual ... OK WARNING: There was 1 warning, see 'd:/Rcompile/CRANpkg/local/2.12/RecordLinkage.Rcheck/00check.log' for details