* using log directory 'd:/Rcompile/CRANpkg/local/2.12/PKmodelFinder.Rcheck' * using R version 2.12.2 (2011-02-25) * using platform: i386-pc-mingw32 (32-bit) * using session charset: ISO8859-1 * checking for file 'PKmodelFinder/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'PKmodelFinder' version '1.1' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'PKmodelFinder' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE PKmodelFinder : I.Comp1.FO.L.optim: no visible binding for global variable 'tot.data' PKmodelFinder : One.FirstOrder.linear1: no visible binding for global variable 'm' PKmodelFinder : One.FirstOrder.linear1: no visible binding for global variable 'K' PKmodelFinder : One.FirstOrder.linear1: no visible binding for global variable 'tot.data' PKmodelFinder : I.Comp1.IVbolus.L.optim: no visible binding for global variable 'tot.data' PKmodelFinder : One.IVbolus.linear1: no visible binding for global variable 'm' PKmodelFinder : One.IVbolus.linear1: no visible binding for global variable 'K' PKmodelFinder : One.IVbolus.linear1: no visible binding for global variable 'tot.data' PKmodelFinder : I.Comp1.IVinf.L.optim: no visible binding for global variable 'tot.data' PKmodelFinder : One.IVinf.linear1: no visible binding for global variable 'm' PKmodelFinder : One.IVinf.linear1: no visible binding for global variable 'K' PKmodelFinder : One.IVinf.linear1: no visible binding for global variable 'tot.data' PKmodelFinder : Comp1.ZO.L: no visible binding for global variable 'Tk0' PKmodelFinder : I.Comp1.ZO.L: no visible binding for global variable 'Tk0' PKmodelFinder : I.Comp1.ZO.L.optim: no visible binding for global variable 'tot.data' PKmodelFinder : One.ZeroOrder.linear1: no visible binding for global variable 'm' PKmodelFinder : One.ZeroOrder.linear1: no visible binding for global variable 'K' PKmodelFinder : One.ZeroOrder.linear1: no visible binding for global variable 'tot.data' PKmodelFinder : I.Comp2.FO.L.optim: no visible binding for global variable 'tot.data' PKmodelFinder : Two.FirstOrder.linear1: no visible binding for global variable 'm' PKmodelFinder : Two.FirstOrder.linear1: no visible binding for global variable 'K' PKmodelFinder : Two.FirstOrder.linear1: no visible binding for global variable 'tot.data' PKmodelFinder : I.Comp2.IVbolus.L.optim: no visible binding for global variable 'tot.data' PKmodelFinder : Two.IVbolus.linear1: no visible binding for global variable 'm' PKmodelFinder : Two.IVbolus.linear1: no visible binding for global variable 'K' PKmodelFinder : I.Comp2.IVinf.L.optim: no visible binding for global variable 'tot.data' PKmodelFinder : Two.IVinf.linear1: no visible binding for global variable 'm' PKmodelFinder : Two.IVinf.linear1: no visible binding for global variable 'K' PKmodelFinder : Two.IVinf.linear1: no visible binding for global variable 'tot.data' PKmodelFinder : Comp2.ZO.L: no visible binding for global variable 'Tk0' PKmodelFinder : I.Comp2.ZO.L: no visible binding for global variable 'Tk0' PKmodelFinder : I.Comp2.ZO.L.optim: no visible binding for global variable 'tot.data' PKmodelFinder : Two.ZeroOrder.linear1: no visible binding for global variable 'm' PKmodelFinder : Two.ZeroOrder.linear1: no visible binding for global variable 'K' PKmodelFinder : Two.ZeroOrder.linear1: no visible binding for global variable 'tot.data' PKmodelFinder : I.Comp3.FO.L.optim: no visible binding for global variable 'tot.data' PKmodelFinder : Three.FirstOrder.linear1: no visible binding for global variable 'm' PKmodelFinder : Three.FirstOrder.linear1: no visible binding for global variable 'K' PKmodelFinder : Three.FirstOrder.linear1: no visible binding for global variable 'tot.data' PKmodelFinder : I.Comp3.IVbolus.L.optim: no visible binding for global variable 'tot.data' PKmodelFinder : Three.IVbolus.linear1: no visible binding for global variable 'm' PKmodelFinder : Three.IVbolus.linear1: no visible binding for global variable 'K' PKmodelFinder : Three.IVbolus.linear1: no visible binding for global variable 'tot.data' PKmodelFinder : I.Comp3.IVinf.L.optim: no visible binding for global variable 'tot.data' PKmodelFinder : Three.IVinf.linear1: no visible binding for global variable 'm' PKmodelFinder : Three.IVinf.linear1: no visible binding for global variable 'K' PKmodelFinder : Three.IVinf.linear1: no visible binding for global variable 'tot.data' PKmodelFinder : Comp3.ZO.L: no visible binding for global variable 'Tk0' PKmodelFinder : I.Comp3.ZO.L: no visible binding for global variable 'Tk0' PKmodelFinder : I.Comp3.ZO.L.optim: no visible binding for global variable 'tot.data' PKmodelFinder : Three.ZeroOrder.linear1: no visible binding for global variable 'm' PKmodelFinder : Three.ZeroOrder.linear1: no visible binding for global variable 'K' PKmodelFinder : Three.ZeroOrder.linear1: no visible binding for global variable 'tot.data' PKmodelFinder : ID.plot: no visible binding for global variable 'Data.Info' PKmodelFinder : ID.plot : updatePlot: no visible binding for global variable 'Data.Info' PKmodelFinder : ID.plot : updatePlot: no visible binding for global variable 'IDlist' PKmodelFinder : ID.plot : Plot1: no visible binding for global variable 'Data.Info' PKmodelFinder : ID.plot : Plot2: no visible binding for global variable 'Data.Info' PKmodelFinder : ID.plot: no visible binding for '<<-' assignment to 'IDlist' PKmodelFinder : ID.plot: no visible binding for global variable 'IDlist' PKmodelFinder : DVvsPRED.plot : updatePlot: no visible binding for global variable 'OUTPUT.tot' PKmodelFinder : DVvsPRED.plot : updatePlot: no visible binding for global variable 'RUN.id' PKmodelFinder : DVvsRES.plot : updatePlot: no visible binding for global variable 'OUTPUT.tot' PKmodelFinder : DVvsRES.plot : updatePlot: no visible binding for global variable 'RUN.id' PKmodelFinder : DVvsRES.plot : Plot1: no visible binding for global variable 'OUTPUT.tot' PKmodelFinder : DVvsRES.plot : Plot1: no visible binding for global variable 'RUN.id' PKmodelFinder : TIMEvsRES.plot : updatePlot: no visible binding for global variable 'OUTPUT.tot' PKmodelFinder : TIMEvsRES.plot : updatePlot: no visible binding for global variable 'RUN.id' PKmodelFinder : TIMEvsDVandPRED.plot: no visible binding for global variable 'OUTPUT.tot' PKmodelFinder : TIMEvsDVandPRED.plot: no visible binding for global variable 'RUN.id' PKmodelFinder : TIMEvsDVandPRED.plot : updatePlot: no visible binding for global variable 'OUTPUT.tot' PKmodelFinder : TIMEvsDVandPRED.plot : updatePlot: no visible binding for global variable 'RUN.id' PKmodelFinder : TIMEvsDVandPRED.plot : updatePlot: no visible binding for global variable 'IDlist' PKmodelFinder : TIMEvsDVandPRED.plot : Plot1: no visible binding for global variable 'OUTPUT.tot' PKmodelFinder : TIMEvsDVandPRED.plot : Plot1: no visible binding for global variable 'RUN.id' PKmodelFinder : TIMEvsDVandPRED.plot : Plot2: no visible binding for global variable 'OUTPUT.tot' PKmodelFinder : TIMEvsDVandPRED.plot : Plot2: no visible binding for global variable 'RUN.id' PKmodelFinder : TIMEvsDVandPRED.plot: no visible binding for '<<-' assignment to 'IDlist' PKmodelFinder : TIMEvsDVandPRED.plot: no visible binding for global variable 'IDlist' PKmodelFinder : EBEvsCOV.plot: no visible binding for global variable 'OUTPUT.tot' PKmodelFinder : EBEvsCOV.plot: no visible binding for global variable 'RUN.id' PKmodelFinder : EBEvsCOV.plot: no visible binding for global variable 'Data.Info' PKmodelFinder : EBEvsCOV.plot: no visible binding for global variable 'tot.data' PKmodelFinder : EBEvsCOV.plot: no visible binding for global variable 'Var.Prop' PKmodelFinder : EBEvsCOV.plot : updatePlot: no visible binding for '<<-' assignment to 'Y' PKmodelFinder : EBEvsCOV.plot : updatePlot: no visible binding for '<<-' assignment to 'X' PKmodelFinder : EBEvsCOV.plot : updatePlot: no visible binding for global variable 'OUTPUT.tot' PKmodelFinder : EBEvsCOV.plot : updatePlot: no visible binding for global variable 'RUN.id' PKmodelFinder : EBEvsCOV.plot : updatePlot: no visible binding for global variable 'X' PKmodelFinder : EBEvsCOV.plot : updatePlot: no visible binding for global variable 'Y' PKmodelFinder : EBEvsCOV.plot : linearD: no visible binding for global variable 'Y' PKmodelFinder : EBEvsCOV.plot : linearD: no visible binding for global variable 'X' PKmodelFinder : dataMake: no visible binding for global variable 'Dose.Info' PKmodelFinder : dataMake: no visible binding for global variable 'Data.Info' PKmodelFinder : setModel: no visible binding for global variable 'tot.data' PKmodelFinder : setModel: no visible binding for '<<-' assignment to 'tot.data' PKmodelFinder : setInitial: no visible binding for global variable 'tot.data' PKmodelFinder : setInitial: no visible binding for global variable 'admin' PKmodelFinder : setInitial: no visible binding for global variable 'param.list' PKmodelFinder : setInitial : : no visible binding for global variable 'tot.data' PKmodelFinder : setInitial : : no visible binding for global variable 'param.list' PKmodelFinder : setInitial : : no visible binding for '<<-' assignment to 'Init.v' PKmodelFinder : setInitial : : no visible binding for '<<-' assignment to 'tot.data' PKmodelFinder : setInitial : : no visible binding for global variable 'comp' PKmodelFinder : setInitial : : no visible binding for global variable 'admin' PKmodelFinder : setInitial : : no visible binding for global variable 'elim' PKmodelFinder : setInitial : : no visible binding for global variable 'model' PKmodelFinder : setInitial : : no visible binding for global variable 'OUTPUT.tot' PKmodelFinder : setInitial : : no visible binding for global variable 'RUN.id' PKmodelFinder : setInitial : : no visible binding for '<<-' assignment to 'OUTPUT.tot' PKmodelFinder : setInitial : : no visible binding for global variable 'output.txt1' PKmodelFinder : Simulation: no visible binding for global variable 'tot.data' PKmodelFinder : Simulation: no visible binding for global variable 'Init.v' PKmodelFinder : Simulation : fr: no visible binding for global variable 'tot.data' PKmodelFinder : Simulation: no visible global function definition for 'loglike.ind.N' PKmodelFinder : Simulation: no visible binding for '<<-' assignment to 'tot.data' PKmodelFinder : Simulation: no visible binding for '<<-' assignment to 'L.KEEP' PKmodelFinder : FisherInfo: no visible binding for global variable 'tot.data' PKmodelFinder : FisherInfo: no visible binding for '<<-' assignment to 'Keep.env' PKmodelFinder : FisherInfo: no visible binding for '<<-' assignment to 'tot.data' PKmodelFinder : Pred: no visible binding for global variable 'tot.data' PKmodelFinder : Pred: no visible binding for '<<-' assignment to 'tot.data' PKmodelFinder : MakeDose : : no visible binding for '<<-' assignment to 'Dose.Info' PKmodelFinder : MakeDV : : no visible binding for '<<-' assignment to 'Data.Info' PKmodelFinder : MakeDV : : no visible binding for '<<-' assignment to 'Var.Prop' PKmodelFinder : PrintResult: no visible binding for global variable 'model' PKmodelFinder : PrintResult: no visible binding for global variable 'param.list' PKmodelFinder : PrintResult: no visible binding for global variable 'result' PKmodelFinder : PrintResult: no visible binding for global variable 'OUTPUT.tot' PKmodelFinder : PrintResult: no visible binding for global variable 'RUN.id' PKmodelFinder : PrintResult: no visible binding for '<<-' assignment to 'OUTPUT.tot' PKmodelFinder : PrintResult: no visible binding for global variable 'output.txt1' PKmodelFinder : OpenDoseFile: no visible binding for '<<-' assignment to 'file.dose' PKmodelFinder : OpenDoseFile: no visible binding for global variable 'file.dose' PKmodelFinder : OpenDataFile: no visible binding for '<<-' assignment to 'file.dose' PKmodelFinder : OpenDataFile: no visible binding for global variable 'file.dose' PKmodelFinder : runPK: no visible binding for '<<-' assignment to 'RUN.id' PKmodelFinder : runPK: no visible binding for global variable 'RUN.id' PKmodelFinder : runPK: no visible binding for '<<-' assignment to 'comp' PKmodelFinder : runPK: no visible binding for global variable 'level1' PKmodelFinder : runPK: no visible binding for '<<-' assignment to 'admin' PKmodelFinder : runPK: no visible binding for global variable 'level2' PKmodelFinder : runPK: no visible binding for '<<-' assignment to 'elim' PKmodelFinder : runPK: no visible binding for global variable 'level3' PKmodelFinder : runPK: no visible binding for '<<-' assignment to 'error' PKmodelFinder : runPK: no visible binding for global variable 'level4' PKmodelFinder : runPK: no visible binding for '<<-' assignment to 'K' PKmodelFinder : runPK: no visible binding for global variable 'KWidget' PKmodelFinder : runPK: no visible binding for '<<-' assignment to 'm' PKmodelFinder : runPK: no visible binding for global variable 'mWidget' PKmodelFinder : runPK: no visible binding for global variable 'comp' PKmodelFinder : runPK: no visible binding for global variable 'admin' PKmodelFinder : runPK: no visible binding for global variable 'elim' PKmodelFinder : runPK: no visible binding for global variable 'Dose.Info' PKmodelFinder : runPK: no visible binding for '<<-' assignment to 'model' PKmodelFinder : runPK: no visible binding for '<<-' assignment to 'param.list' PKmodelFinder : runPK: no visible binding for global variable 'model' PKmodelFinder : runPK : : no visible binding for '<<-' assignment to 'Tk0' PKmodelFinder : runPK : : no visible binding for global variable 'model' PKmodelFinder : runPK: no visible binding for '<<-' assignment to 'result' PKmodelFinder: no visible binding for '<<-' assignment to 'RUN.id' PKmodelFinder: no visible binding for '<<-' assignment to 'OUTPUT.tot' PKmodelFinder: no visible binding for '<<-' assignment to 'PKSAEM.win' PKmodelFinder : : no visible binding for global variable 'NONMEM.win' PKmodelFinder: no visible binding for global variable 'PKSAEM.win' PKmodelFinder: no visible binding for '<<-' assignment to 'level1' PKmodelFinder: no visible binding for '<<-' assignment to 'level2' PKmodelFinder: no visible binding for '<<-' assignment to 'level3' PKmodelFinder: no visible binding for '<<-' assignment to 'level4' PKmodelFinder: no visible binding for global variable 'level1' PKmodelFinder: no visible binding for global variable 'level2' PKmodelFinder: no visible binding for global variable 'level3' PKmodelFinder: no visible binding for global variable 'level4' PKmodelFinder: no visible binding for '<<-' assignment to 'KWidget' PKmodelFinder: no visible binding for global variable 'KWidget' PKmodelFinder: no visible binding for '<<-' assignment to 'mWidget' PKmodelFinder: no visible binding for global variable 'mWidget' Found possibly global 'T' or 'F' in the following function: PKmodelFinder * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... OK * checking PDF version of manual ... OK