* using log directory 'd:/Rcompile/CRANpkg/local/2.12/NestedCohort.Rcheck' * using R version 2.12.2 (2011-02-25) * using platform: i386-pc-mingw32 (32-bit) * using session charset: ISO8859-1 * checking for file 'NestedCohort/DESCRIPTION' ... OK * this is package 'NestedCohort' version '1.1-2' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'NestedCohort' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... NOTE Found the following CITATION file(s) in a non-standard place: CITATION Most likely inst/CITATION should be used instead. * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE nested.coxph: no visible binding for global variable 'p.i.h.a.t.' nested.km: no visible binding for global variable 'p.i.h.a.t.' nested.stdsurv: no visible binding for global variable 'p.i.h.a.t.' * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking data for non-ASCII characters ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... NOTE *** PDFLaTeX Errors *** File d:/Rcompile/CRANpkg/local/2.12/NestedCohort.Rcheck/inst/doc/NestedCohort.Rnw : running 'texi2dvi' on 'NestedCohort.tex' failed LaTeX errors: ! LaTeX Error: File `psfig.sty' not found. Type X to quit or to proceed, or enter new name. (Default extension: sty) * checking PDF version of manual ... OK