* using log directory 'd:/Rcompile/CRANpkg/local/2.10/r4ss.Rcheck'
* using R version 2.10.1 (2009-12-14)
* using session charset: ISO8859-1
* checking for file 'r4ss/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'r4ss' version '1.11'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'r4ss' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
DoProjectPlots: no visible binding for global variable '.SavedPlots'
SS_plots: no visible binding for global variable 'ReportObject'
SS_plots: no visible binding for global variable '.SavedPlots'
SSmakesims: no visible global function definition for 'makectl'
SSmakesims: no visible binding for global variable 'maxb'
SSmakesims: no visible binding for global variable 'newr'
SSmakesims: no visible global function definition for 'SS_readstarter'
SSmakesims: no visible global function definition for 'SS_writestarter'
SSplotComps: multiple local function definitions for 'tempfun' with
  different formal arguments
SSplotNumbers: multiple local function definitions for 'tempfun' with
  different formal arguments
SSplotPars: no visible binding for global variable '.SavedPlots'
SSrunsims: no visible global function definition for 'SS_readctl'
SSv3_plots : matchfun2: no visible binding for global variable 'rawrep'
SSv3_plots: no visible binding for global variable '.SavedPlots'
SSv3_plots: no visible binding for global variable 'maxyr'
SSv3_plots : SSv3_plot_comps: multiple local function definitions for
  'tempfun' with different formal arguments
SSv3_plots: multiple local function definitions for 'tempfun' with
  different formal arguments
sel.line : sel: no visible binding for global variable 'nlength'
Found possibly global 'T' or 'F' in the following functions:
  DoProjectPlots SS_fitbiasramp SS_output SS_parlines SS_profile
  SS_splitdat SSmakesims SSplotBiology SSplotIndices SSplotPars
  SSplotRecdist SSrunsims SSv3_output SSv3_plots mountains movepars
  stackpoly update_r4ss_files
* checking Rd files ... NOTE
prepare_Rd: SS_plots.Rd:166-168: Dropping empty section \details
prepare_Rd: SS_plots.Rd:169-175: Dropping empty section \value
prepare_Rd: SS_plots.Rd:182-184: Dropping empty section \note
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prepare_Rd: SS_plots.Rd:198-199: Dropping empty section \examples
prepare_Rd: SSgetoutput.Rd:53-55: Dropping empty section \details
prepare_Rd: SSgetoutput.Rd:56-62: Dropping empty section \value
prepare_Rd: SSgetoutput.Rd:69-71: Dropping empty section \note
prepare_Rd: SSgetoutput.Rd:63-65: Dropping empty section \references
prepare_Rd: SSgetoutput.Rd:80-81: Dropping empty section \examples
prepare_Rd: SSmakesims.Rd:43-44: Dropping empty section \references
prepare_Rd: SSplotBiology.Rd:77-79: Dropping empty section \details
prepare_Rd: SSplotBiology.Rd:80-86: Dropping empty section \value
prepare_Rd: SSplotBiology.Rd:93-95: Dropping empty section \note
prepare_Rd: SSplotBiology.Rd:87-89: Dropping empty section \references
prepare_Rd: SSplotBiology.Rd:102-103: Dropping empty section \examples
prepare_Rd: SSplotCatch.Rd:102-104: Dropping empty section \details
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prepare_Rd: SSplotComps.Rd:173-175: Dropping empty section \details
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prepare_Rd: SSplotIndices.Rd:77-79: Dropping empty section \details
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prepare_Rd: SSplotMnwt.Rd:75-77: Dropping empty section \details
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prepare_Rd: SSplotNumbers.Rd:115-117: Dropping empty section \seealso
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prepare_Rd: SSplotRecdevs.Rd:90-92: Dropping empty section \details
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prepare_Rd: SSplotRecdevs.Rd:106-108: Dropping empty section \note
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prepare_Rd: SSplotRecdevs.Rd:112-114: Dropping empty section \seealso
prepare_Rd: SSplotRecdevs.Rd:115-116: Dropping empty section \examples
prepare_Rd: SSplotRecdist.Rd:70-72: Dropping empty section \details
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prepare_Rd: SSplotRecdist.Rd:86-88: Dropping empty section \note
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prepare_Rd: SSplotSPR.Rd:85-87: Dropping empty section \details
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prepare_Rd: SSplotSelex.Rd:82-84: Dropping empty section \details
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prepare_Rd: SSplotSpawnrecruit.Rd:88-90: Dropping empty section \details
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prepare_Rd: SSplotTags.Rd:97-99: Dropping empty section \details
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* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking examples ... OK
* checking PDF version of manual ... OK