* using log directory 'd:/Rcompile/CRANpkg/local/2.10/hydrosanity.Rcheck' * using R version 2.10.1 (2009-12-14) * using session charset: ISO8859-1 * checking for file 'hydrosanity/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'hydrosanity' version '0.8.76' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'hydrosanity' can be installed ... WARNING Found the following significant warnings: Warning: replacing previous import 'update' when loading 'stats' See 'd:/Rcompile/CRANpkg/local/2.10/hydrosanity.Rcheck/00install.out' for details. * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE .hs_layers_event: no visible global function definition for 'plotAndPlayGetCurrState' .hs_layers_event: no visible global function definition for 'plotAndPlayGetToolbar' .hs_layers_event: no visible binding for global variable 'add.cities' .hs_layers_event: no visible global function definition for 'plotAndPlaySetCurrState' .hs_layers_event: no visible global function definition for 'plotAndPlayUpdate' .hs_map_setregion_event: no visible global function definition for 'plotAndPlayGetCurrState' .hs_map_setregion_event: no visible global function definition for 'plotAndPlayGetToolbar' .hs_on_corr_calculate_contiguous_button_clicked: no visible binding for global variable 'hsp' .hs_on_corr_ccfplot_button_clicked: no visible binding for global variable 'hsp' .hs_on_corr_relationplot_button_clicked: no visible binding for global variable 'hsp' .hs_on_explore_cdf_button_clicked: no visible binding for global variable 'hsp' .hs_on_explore_seasonal_button_clicked: no visible binding for global variable 'hsp' .hs_on_explore_timeseries_button_clicked: no visible binding for global variable 'hsp' .hs_on_export_button_clicked: no visible binding for global variable 'hsp' .hs_on_import_file_button_clicked: no visible binding for global variable 'hsp' .hs_on_import_makefactor_button_clicked: no visible binding for global variable 'tmp.factor' .hs_on_import_summary_treeview_role_edited: no visible binding for global variable 'hsp' .hs_on_import_viewtable_button_clicked: no visible binding for global variable 'hsp' .hs_on_import_viewtable_button_clicked: no visible binding for '<<-' assignment to 'hsp' .hs_on_impute_calculate_gaps_button_clicked: no visible binding for global variable 'hsp' .hs_on_impute_missing_button_clicked: no visible binding for global variable 'hsp' .hs_on_impute_missingatrandom_button_clicked: no visible binding for global variable 'hsp' .hs_on_impute_view_error_scatter_button_clicked: no visible binding for global variable 'hsp' .hs_on_menu_quit_activate: no visible binding for global variable 'hsp' .hs_on_menu_quit_activate: no visible binding for global variable 'win' .hs_on_menu_quit_activate: no visible binding for global variable 'GUI' .hs_on_multivar_lagseries_button_clicked: no visible binding for global variable 'hsp' .hs_on_multivar_relationplot_button_clicked: no visible binding for global variable 'hsp' .hs_on_rain_grids_make_areal_button_clicked: no visible global function definition for 'overlay' .hs_on_rain_mosaic_make_areal_button_clicked: no visible global function definition for 'coordinates' .hs_on_rain_mosaic_make_areal_button_clicked: no visible binding for global variable 'getPolygonAreaSlot' .hs_on_rain_mosaic_make_areal_button_clicked: no visible global function definition for 'getSpPPolygonsIDSlots' .hs_on_rain_mosaic_make_areal_button_clicked: no visible global function definition for 'overlay' .hs_on_rain_view_grids_button_clicked : : no visible binding for global variable 'hsp' .hs_on_rain_view_grids_button_clicked : : no visible global function definition for 'sp.polygons' .hs_on_rain_view_grids_button_clicked: no visible binding for global variable 'hsp' .hs_on_rain_view_mosaic_button_clicked: no visible binding for global variable 'hsp' .hs_on_rain_view_mosaic_button_clicked: no visible global function definition for 'coordinates' .hs_on_rain_view_mosaic_button_clicked : : no visible global function definition for 'sp.polygons' .hs_on_rain_view_mosaic_button_clicked : : no visible global function definition for 'getSpPPolygonsLabptSlots' .hs_on_rain_view_mosaic_button_clicked : : no visible global function definition for 'getSpPPolygonsIDSlots' .hs_on_rain_view_surface_button_clicked: no visible binding for global variable 'hsp' .hs_on_rain_view_surface_button_clicked : : no visible binding for global variable 'hsp' .hs_on_rain_view_surface_button_clicked : : no visible global function definition for 'sp.polygons' .hs_on_scope_import_button_clicked: no visible binding for global variable 'tmp.sites' .hs_on_scope_viewdbsitemap_button_clicked : : no visible binding for global variable 'hsp' .hs_on_scope_viewdbsitemap_button_clicked : : no visible global function definition for 'sp.polygons' .hs_on_scope_viewdbsitemap_button_clicked: no visible binding for global variable 'hsp' .hs_on_scope_viewdbsitemap_button_clicked: no visible binding for global variable 'tmp.sites' .hs_on_scope_viewdbtimeline_button_clicked: no visible binding for global variable 'hsp' .hs_on_scope_viewdbtimeline_button_clicked: no visible binding for global variable 'tmp.sites' .hs_on_scope_viewsitemap_button_clicked: no visible binding for global variable 'hsp' .hs_on_scope_viewsitemap_button_clicked : : no visible binding for global variable 'hsp' .hs_on_scope_viewsitemap_button_clicked : : no visible global function definition for 'sp.polygons' .hs_time_centre_event: no visible global function definition for 'plotAndPlayGetCurrState' .hs_time_centre_event: no visible global function definition for 'plotAndPlayGetToolbar' .hs_time_centre_event: no visible global function definition for 'plotAndPlayMakePrompt' .hs_time_centre_event: no visible global function definition for 'plotAndPlayUnmakePrompt' .hs_time_centre_event: no visible global function definition for 'plotAndPlaySetPrompt' .hs_time_centre_event: no visible global function definition for 'plotAndPlaySetCurrState' .hs_time_centre_event: no visible global function definition for 'plotAndPlayUpdate' .hs_time_logscale_event: no visible global function definition for 'plotAndPlayGetCurrState' .hs_time_logscale_event: no visible global function definition for 'plotAndPlayGetToolbar' .hs_time_logscale_event: no visible global function definition for 'plotAndPlaySetCurrState' .hs_time_logscale_event: no visible global function definition for 'plotAndPlayUpdate' .hs_time_setperiod_event: no visible global function definition for 'plotAndPlayGetCurrState' .hs_time_setperiod_event: no visible global function definition for 'plotAndPlayGetToolbar' .hs_time_zoomin_event: no visible global function definition for 'plotAndPlayGetCurrState' .hs_time_zoomin_event: no visible global function definition for 'plotAndPlayGetToolbar' .hs_time_zoomin_event: no visible global function definition for 'plotAndPlayMakePrompt' .hs_time_zoomin_event: no visible global function definition for 'plotAndPlayUnmakePrompt' .hs_time_zoomin_event: no visible global function definition for 'plotAndPlaySetPrompt' .hs_time_zoomin_event: no visible global function definition for 'plotAndPlaySetCurrState' .hs_time_zoomin_event: no visible global function definition for 'plotAndPlayUpdate' .hs_time_zoomout_event: no visible global function definition for 'plotAndPlayGetCurrState' .hs_time_zoomout_event: no visible global function definition for 'plotAndPlayGetToolbar' .hs_time_zoomout_event: no visible global function definition for 'plotAndPlaySetCurrState' .hs_time_zoomout_event: no visible global function definition for 'plotAndPlayUpdate' arealSubPolygons: no visible global function definition for 'SpatialPolygons' as.Polygons.gpc.poly : : no visible global function definition for 'Polygon' as.Polygons.gpc.poly: no visible global function definition for 'Polygons' as.SpatialPolygons.voronoi.polygons: no visible global function definition for 'Polygon' as.SpatialPolygons.voronoi.polygons: no visible global function definition for 'Polygons' as.SpatialPolygons.voronoi.polygons: no visible global function definition for 'SpatialPolygons' datasetModificationUpdate: no visible binding for '<<-' assignment to 'hsp' datasetModificationUpdate: no visible binding for global variable 'hsp' iconViewSetSelection: no visible binding for global variable 'hsp' notInterp: no visible global function definition for 'overlay' notInterp: no visible global function definition for 'SpatialPoints' openProject: no visible binding for '<<-' assignment to 'hsp' openProject: no visible binding for global variable 'hsp' panel.cities: no visible binding for global variable 'world.cities' readGDAL_fixed: no visible global function definition for 'readGDAL' readGDAL_fixed: no visible global function definition for 'gridparameters' regionModificationUpdate: no visible binding for '<<-' assignment to 'hsp' regionModificationUpdate: no visible binding for global variable 'hsp' saveProject: no visible binding for global variable 'hsp' saveProject: no visible binding for '<<-' assignment to 'hsp' setPeriodTool: no visible global function definition for 'quickTool' setRegionTool: no visible global function definition for 'quickTool' setupIconView: no visible binding for global variable 'hsp' subGrid: no visible global function definition for 'fullgrid' subGrid: no visible global function definition for 'coordinatevalues' subGrid: no visible global function definition for 'getGridTopology' timeperiodModificationUpdate: no visible binding for '<<-' assignment to 'hsp' timeperiodModificationUpdate: no visible binding for global variable 'hsp' updateImportPage: no visible binding for global variable 'hsp' updateMultivarPage: no visible binding for global variable 'hsp' updateSummaryPage: no visible binding for global variable 'hsp' updateTimePeriodPage: no visible binding for global variable 'hsp' * checking Rd files ... NOTE prepare_Rd: aggregate.timeblob.Rd:31-33: Dropping empty section \examples prepare_Rd: gaps.Rd:38-39: Dropping empty section \examples prepare_Rd: grid.timeline.plot.Rd:46-48: Dropping empty section \examples prepare_Rd: grid.timeseries.plot.Rd:64-66: Dropping empty section \examples prepare_Rd: grid.xaxis.POSIXt.Rd:30-32: Dropping empty section \examples prepare_Rd: grid.yaxis.log.Rd:43-45: Dropping empty section \examples prepare_Rd: hydrosanity.caption.Rd:33-35: Dropping empty section \examples prepare_Rd: impute.timeblobs.Rd:47-49: Dropping empty section \examples prepare_Rd: read.timeblob.Rd:37-39: Dropping empty section \details prepare_Rd: read.timeblob.Rd:45-47: Dropping empty section \examples prepare_Rd: smooth.timeblob.Rd:27-29: Dropping empty section \examples prepare_Rd: summaryMissing.timeblobs.Rd:28-30: Dropping empty section \examples prepare_Rd: sync.timeblobs.Rd:41-43: Dropping empty section \examples prepare_Rd: timeblob.Rd:45-47: Dropping empty section \examples prepare_Rd: truncMonth.Rd:30-32: Dropping empty section \examples prepare_Rd: window.timeblob.Rd:45-47: Dropping empty section \examples * checking Rd metadata ... OK * checking Rd cross-references ... WARNING Unknown package(s) 'sp' in Rd xrefs * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking examples ... OK * checking PDF version of manual ... OK