* using log directory 'd:/Rcompile/CRANpkg/local/2.10/diseasemapping.Rcheck'
* using R version 2.10.1 (2009-12-14)
* using session charset: ISO8859-1
* checking for file 'diseasemapping/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'diseasemapping' version '0.5.3'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'diseasemapping' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
prepare_Rd: computeArea.Rd:19: Dropping empty section \seealso
prepare_Rd: diseasemapping-package.Rd:12-14: Dropping empty section \details
prepare_Rd: expandCensus.Rd:53: Dropping empty section \keyword
prepare_Rd: expandCensus.Rd:54: Dropping empty section \keyword
prepare_Rd: expandCensus.Rd:27-29: Dropping empty section \details
prepare_Rd: expandCensus.Rd:30-32: Dropping empty section \value
prepare_Rd: expandCensus.Rd:39-41: Dropping empty section \note
prepare_Rd: expandCensus.Rd:33-35: Dropping empty section \references
prepare_Rd: expandCensus.Rd:45-46: Dropping empty section \seealso
prepare_Rd: expandCensus.Rd:48-50: Dropping empty section \examples
prepare_Rd: formatCases.Rd:44: Dropping empty section \keyword
prepare_Rd: formatCases.Rd:45: Dropping empty section \keyword
prepare_Rd: formatCases.Rd:29-31: Dropping empty section \note
prepare_Rd: formatCases.Rd:27: Dropping empty section \references
prepare_Rd: formatCases.Rd:32: Dropping empty section \seealso
prepare_Rd: formatPopulation.Rd:64: Dropping empty section \keyword
prepare_Rd: formatPopulation.Rd:65: Dropping empty section \keyword
prepare_Rd: getBreaks.Rd:31: Dropping empty section \keyword
prepare_Rd: getBreaks.Rd:32: Dropping empty section \keyword
prepare_Rd: getBreaks.Rd:17-19: Dropping empty section \details
prepare_Rd: getBreaks.Rd:23-24: Dropping empty section \note
prepare_Rd: getBreaks.Rd:22: Dropping empty section \author
prepare_Rd: getBreaks.Rd:21: Dropping empty section \references
prepare_Rd: getBreaks.Rd:25: Dropping empty section \seealso
prepare_Rd: getRates.Rd:51: Dropping empty section \keyword
prepare_Rd: getRates.Rd:52: Dropping empty section \keyword
prepare_Rd: getRates.Rd:41-42: Dropping empty section \note
prepare_Rd: getRates.Rd:39: Dropping empty section \references
prepare_Rd: getRates.Rd:43: Dropping empty section \seealso
prepare_Rd: getSMR.Rd:50: Dropping empty section \keyword
prepare_Rd: getSMR.Rd:51: Dropping empty section \keyword
prepare_Rd: getSMR.Rd:42: Dropping empty section \seealso
prepare_Rd: getStdRate.Rd:55: Dropping empty section \keyword
prepare_Rd: getStdRate.Rd:56: Dropping empty section \keyword
prepare_Rd: getStdRate.Rd:16-18: Dropping empty section \details
prepare_Rd: getStdRate.Rd:19-21: Dropping empty section \value
prepare_Rd: getStdRate.Rd:24-25: Dropping empty section \note
prepare_Rd: getStdRate.Rd:22: Dropping empty section \references
prepare_Rd: getStdRate.Rd:26: Dropping empty section \seealso
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... ERROR
Running examples in 'diseasemapping-Ex.R' failed.
The error most likely occurred in:

> ### * CanadaCancerRates
> 
> flush(stderr()); flush(stdout())
> 
> ### Name: CanadaCancerRates
> ### Title: Retreive cancer incidence rates from the Public Health Agency of
> ###   Canada
> ### Aliases: CanadaCancerRates
> 
> ### ** Examples
> 
> qcLungF=CanadaCancerRates(area="quebec", years=2001:2003, site="lung", sex="F")
> data(popdata)
> qcLungExp = getSMR(popdata, qcLungF)
Warning in getSMR.data.frame(popdata@data, ...) :
  population group(s) M0_4, M5_9, M10_14, M15_19, M20_24, M25_29, M30_34, M35_39, M40_44, M45_49, M50_54, M55_59, M60_64, M65_69, M70_74, M75_79, M80_84, M85plus ignored
Warning in getSMR.data.frame(popdata@data, ...) :
  rate group(s) F1-4 ignored

Loading required package: sp
Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE,  :
  there is no package called 'sp'
Error in .requirePackage(package) : unable to find required package "sp"
Calls: getSMR ... checkSlotAssignment -> getClass -> getClassDef -> .requirePackage
Execution halted