* using log directory 'd:/Rcompile/CRANpkg/local/2.10/caTools.Rcheck' * using R version 2.10.1 (2009-12-14) * using session charset: ISO8859-1 * checking for file 'caTools/DESCRIPTION' ... OK * this is package 'caTools' version '1.10' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'caTools' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... WARNING Unknown package(s) 'gdDevices' in Rd xrefs Missing link(s) in documentation object './man/GIF.Rd': '[grDevices]{terrain.colors.colors}' Missing link(s) in documentation object './man/combs.Rd': '[vsn]{nchoosek}' Missing link(s) in documentation object './man/runmad.Rd': '[fSeries]{rollVar}' '[fSeries]{rollFun}' '[zoo]{rapply}' Missing link(s) in documentation object './man/runmean.Rd': '[fSeries]{rollMean}' '[fSeries]{rollFun}' '[zoo]{rapply}' Missing link(s) in documentation object './man/runminmax.Rd': '[fSeries]{rollMin}' '[fSeries]{rollMax}' '[fSeries]{rollFun}' '[zoo]{rapply}' Missing link(s) in documentation object './man/runquantile.Rd': '[fSeries]{rollMin}' '[fSeries]{rollMax}' '[fSeries]{rollFun}' '[zoo]{rapply}' Missing link(s) in documentation object './man/runsd.Rd': '[fSeries]{rollVar}' '[fSeries]{rollFun}' '[zoo]{rapply}' See the information in section 'Cross-references' of the 'Writing R Extensions' manual. * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... NOTE S3 methods shown with full name in documentation object 'predict.LogitBoost': predict.LogitBoost S3 methods shown with full name in documentation object 'sum.exact, cumsum.exact & runsum.exact': sum.exact cumsum.exact The \usage entries for S3 methods should use the \method markup and not their full name. See the chapter 'Writing R documentation files' in manual 'Writing R Extensions'. * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking for portable use of $BLAS_LIBS ... OK * checking examples ... OK * checking PDF version of manual ... OK