mantel.rtest {ade4} | R Documentation |
Performs a Mantel test between two distance matrices.
mantel.rtest(m1, m2, nrepet = 99)
m1 |
an object of class 'dist' |
m2 |
an object of class 'dist' |
nrepet |
the number of permutations |
an object of class 'rtest' (randomization tests)
Mantel, N. (1967) The detection of disease clustering and a generalized regression approach. Cancer Research, 27, 209220.
if (require(mva, quietly=TRUE)) { data(yanomama) gen <- quasieuclid(as.dist(yanomama$gen)) geo <- quasieuclid(as.dist(yanomama$geo)) plot(r1 <- mantel.rtest(geo,gen), main = "Mantel's test") r1 }