permControl {perm} | R Documentation |
A function to create a list of arguments for permTS
, permKS
or
permTREND
.
permControl(cm=NULL,nmc=10^3-1,seed=1234321,digits=12,p.conf.level=.99,setSEED=TRUE)
cm |
a choose(n,m) by n matrix, used if method='exact.ce', ignored otherwise |
nmc |
number of Monte Carlo replications, used if method='exact.mc', ignored otherwise |
seed |
value used in set.seed if method='exact.mc', ignored otherwise |
setSEED |
logical, set to FALSE when performing simulations that use method='exact.mc' |
p.conf.level |
confidence level for p value estimate, used if method='exact.mc', ignored otherwise |
digits |
number of digits to use in signif for precision of test statistics |
When cm
=NULL the resulting matrix is created by chooseMatrix
, it may be optionally provided here
only so that chooseMatrix
does not need to be repeatedly called in simulations. Also when doing simulations with
method='exact.mc', use setSEED=FALSE so that the seed is not reset to the same value each time you call the permutation test
function.
See calcPvalsMC
for description of how p.conf.level is used.
An list with the arguments as components.