simugeno {forensim}R Documentation

forensim class for simluated genotypes

Description

The S4 simugeno class is used to store existing or simulated genotypes.

Slots

tab.freq:
a list giving allele frequencies for each locus. If there are several populations, tab.freq gives allele frequencies in each population
nind:
integer vector giving the number of individuals. If there are several populations, nind gives the numbers of individuals per population
pop.names:
factor of populations names
popind:
factor giving the population of each individual
which.loc:
character vector giving the locus names
tab.geno:
matrix giving the genotypes (in rows) for each locus (in columns). The genotype of a homozygous individual carrying the allele "12" is coded "12/12". A heterozygous individual carrying alleles "12" and "13" is coded "12/13" or "13/12".
indID:
character vector giving the individuals ID

Methods

names
signature(x = "simugeno"): gives the names of the attributes of a simugeno object
show
signature(object = "simugeno"): shows a simugeno object
print
signature(object = "simugeno"): prints a simugeno object

Author(s)

Hinda Haned haned@biomserv.univ-lyon1.fr

See Also

as.simugeno for the simugeno class constructor, is.simugeno, simumix and tabfreq

Examples

showClass("simugeno")


[Package forensim version 1.1-1 Index]