ProbeLevelTransform {aroma.affymetrix} | R Documentation |
Package: aroma.affymetrix
Class ProbeLevelTransform
Object
~~|
~~+--
AromaTransform
~~~~~~~|
~~~~~~~+--
Transform
~~~~~~~~~~~~|
~~~~~~~~~~~~+--
ProbeLevelTransform
Directly known subclasses:
AbstractProbeSequenceNormalization, AllelicCrosstalkCalibration, BackgroundCorrection, BaseCountNormalization, BasePositionNormalization, DChipQuantileNormalization, GcRmaBackgroundCorrection, LimmaBackgroundCorrection, LinearModelProbeSequenceNormalization, MatNormalization, MatSmoothing, NormExpBackgroundCorrection, OpticalBackgroundCorrection, ProbeLevelTransform3, QuantileNormalization, ReseqCrosstalkCalibration, RmaBackgroundCorrection, ScaleNormalization, ScaleNormalization3, SpatialRowColumnNormalization, UnitTypeScaleNormalization
public abstract static class ProbeLevelTransform
extends Transform
This abstract class represents a transformation methods that transforms probe-level signals, typically intensities.
ProbeLevelTransform(...)
... |
Arguments passed to the constructor of Transform . |
Subclasses must implement the process()
method.
Methods:
No methods defined.
Methods inherited from Transform:
getOutputDataSet, getOutputDataSetOLD20090509, getOutputFiles
Methods inherited from AromaTransform:
getExpectedOutputFiles, getExpectedOutputFullnames, getFullName, getInputDataSet, getName, getOutputDataSet, getOutputDataSet0, getOutputFiles, getPath, getTags, isDone, process, setTags
Methods inherited from Object:
asThis, $, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clone, detach, equals, extend, finalize, gc, getEnvironment, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, objectSize, print, registerFinalizer, save
Henrik Bengtsson (http://www.braju.com/R/)