ChipEffectGroupMerge {aroma.affymetrix}R Documentation

The ChipEffectGroupMerge class

Description

Package: aroma.affymetrix
Class ChipEffectGroupMerge

Object
~~|
~~+--AromaTransform
~~~~~~~|
~~~~~~~+--Transform
~~~~~~~~~~~~|
~~~~~~~~~~~~+--ChipEffectTransform
~~~~~~~~~~~~~~~~~|
~~~~~~~~~~~~~~~~~+--ChipEffectGroupMerge

Directly known subclasses:
SnpChipEffectGroupMerge

public static class ChipEffectGroupMerge
extends ChipEffectTransform

This class represents a method that merges chip effects across groups unit by unit.

Usage

ChipEffectGroupMerge(dataSet=NULL, fcn=NULL, ...)

Arguments

dataSet A ChipEffectSet.
fcn A function used to "merge" groups.
... Additional arguments passed to the constructor of ChipEffectTransform.

Fields and Methods

Methods:
getCdf -
getMergeFunction -
process Normalizes the data set.
setMergeFunction -

Methods inherited from Transform:
getOutputDataSet, getOutputDataSetOLD20090509, getOutputFiles

Methods inherited from AromaTransform:
getExpectedOutputFiles, getExpectedOutputFullnames, getFullName, getInputDataSet, getName, getOutputDataSet, getOutputDataSet0, getOutputFiles, getPath, getTags, isDone, process, setTags

Methods inherited from Object:
asThis, $, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clone, detach, equals, extend, finalize, gc, getEnvironment, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, objectSize, print, registerFinalizer, save

Author(s)

Henrik Bengtsson (http://www.braju.com/R/)


[Package aroma.affymetrix version 1.2.0 Index]