DChipDcpSet {aroma.affymetrix} | R Documentation |
Package: aroma.affymetrix
Class DChipDcpSet
Object
~~|
~~+--
GenericDataFileSet
~~~~~~~|
~~~~~~~+--
AromaMicroarrayDataSet
~~~~~~~~~~~~|
~~~~~~~~~~~~+--
AromaPlatformInterface
~~~~~~~~~~~~~~~~~|
~~~~~~~~~~~~~~~~~+--
AffymetrixFileSet
~~~~~~~~~~~~~~~~~~~~~~|
~~~~~~~~~~~~~~~~~~~~~~+--
DChipDcpSet
Directly known subclasses:
public abstract static class DChipDcpSet
extends AffymetrixFileSet
A DChipDcpSet object represents a set of DChip DCP files for identical chip types.
DChipDcpSet(files=NULL, ...)
files |
A list of DChipDcpFile :s. |
... |
Not used. |
Methods:
as | - | |
as.DChipDcpSet | Coerce an object to an DChipDcpSet object. | |
byName | - | |
exportTotalAndFracB | - | |
extractTheta | - | |
findByName | - | |
fromFiles | - | |
getCdfBin | - | |
getChipType | - | |
getFullName | - | |
nbrOfArrays | Gets the number of arrays in the file set. |
Methods inherited from AffymetrixFileSet:
as, as.AffymetrixFileSet, fromFiles
Methods inherited from AromaPlatformInterface:
getAromaPlatform, getPlatform, getUnitAnnotationDataFile, getUnitNamesFile, getUnitTypesFile
Methods inherited from AromaMicroarrayDataSet:
getChipType, getPlatform, nbrOfArrays, setAttributesBy, setAttributesBySampleAnnotationFile, setAttributesBySampleAnnotationSet, validate
Methods inherited from GenericDataFileSet:
append, appendFiles, as.list, byName, clearCache, copyTo, equals, extract, findByName, fromFiles, getAlias, getFile, getFileClass, getFileSize, getFullName, getFullNames, getFullNameTranslator, getName, getNames, getPath, getPathnames, getTags, hasFile, hasTag, hasTags, indexOf, lapply, nbrOfFiles, sapply, seq, setAlias, setFullName, setFullNamesTranslator, setFullNameTranslator, setName, setTags, update2, validate
Methods inherited from Object:
asThis, $, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clone, detach, equals, extend, finalize, gc, getEnvironment, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, objectSize, print, registerFinalizer, save
Henrik Bengtsson (http://www.braju.com/R/)