fitQuantileNormFcn.AffymetrixCelFile {aroma.affymetrix}R Documentation

Fits quantile normalization functions for the arrays in the data set

Description

Fits quantile normalization functions for the arrays in the data set.

Usage

## S3 method for class 'AffymetrixCelFile':
fitQuantileNormFcn(this, yTarget, subset=NULL, ..., spar=NULL, nknots=1024, verbose=FALSE)

Arguments

yTarget The target probe signals.
subset An optional numeric vector specifying the indices of the subset of probes to be used to fit the normalization function.
spar, nknots Control parameters passed to smooth.spline.
... Not used.
verbose See Verbose.

Value

Returns a normalization function.

Author(s)

Henrik Bengtsson (http://www.braju.com/R/)

See Also

For more information see AffymetrixCelFile.


[Package aroma.affymetrix version 1.2.0 Index]