UnitTypeScaleNormalization {aroma.affymetrix} | R Documentation |
Package: aroma.affymetrix
Class UnitTypeScaleNormalization
Object
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AromaTransform
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Transform
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ProbeLevelTransform
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ProbeLevelTransform3
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UnitTypeScaleNormalization
Directly known subclasses:
public static class UnitTypeScaleNormalization
extends ProbeLevelTransform3
This class represents a normalization function that transforms the probe signals such that each unit type gets the same average.
UnitTypeScaleNormalization(..., targetAvg=4400)
... |
Arguments passed to the constructor of
ProbeLevelTransform3 . |
targetAvg |
A numeric value. |
Methods:
process | Normalizes the data set. |
Methods inherited from ProbeLevelTransform3:
clearCache, getCellsTo, getCellsToFit, getCellsToUpdate, getUnitsTo, getUnitsToFit, getUnitsToUpdate, writeSignals
Methods inherited from Transform:
getOutputDataSet, getOutputDataSetOLD20090509, getOutputFiles
Methods inherited from AromaTransform:
getExpectedOutputFiles, getExpectedOutputFullnames, getFullName, getInputDataSet, getName, getOutputDataSet, getOutputDataSet0, getOutputFiles, getPath, getTags, isDone, process, setTags
Methods inherited from Object:
asThis, $, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clone, detach, equals, extend, finalize, gc, getEnvironment, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, objectSize, print, registerFinalizer, save
Henrik Bengtsson (http://www.braju.com/R/)