HetLogAddCnPlm {aroma.affymetrix} | R Documentation |
Package: aroma.affymetrix
Class HetLogAddCnPlm
Object
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Model
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UnitModel
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MultiArrayUnitModel
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ProbeLevelModel
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RmaPlm
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HetLogAddPlm
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HetLogAddSnpPlm
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SnpPlm
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CnPlm
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HetLogAddCnPlm
Directly known subclasses:
public static class HetLogAddCnPlm
extends CnPlm
HetLogAddCnPlm(..., combineAlleles=FALSE)
... |
Arguments passed to HetLogAddCnPlm . |
combineAlleles |
If FALSE , allele A and allele B are treated
seperately, otherwise together. |
Methods:
No methods defined.
Methods inherited from CnPlm:
getCellIndices, getChipEffectSet, getCombineAlleles, getProbeAffinityFile, setCombineAlleles
Methods inherited from SnpPlm:
getCellIndices, getChipEffectSet, getMergeStrands, getProbeAffinityFile, setMergeStrands
Methods inherited from HetLogAddSnpPlm:
getAsteriskTags
Methods inherited from HetLogAddPlm:
getAsteriskTags
Methods inherited from RmaPlm:
getAsteriskTags, getCalculateResidualsFunction
Methods inherited from ProbeLevelModel:
calculateResidualSet, calculateWeights, fit, getAsteriskTags, getCalculateResidualsFunction, getChipEffectSet, getProbeAffinityFile, getResidualSet, getWeightsSet
Methods inherited from MultiArrayUnitModel:
getListOfPriors, setListOfPriors, validate
Methods inherited from UnitModel:
findUnitsTodo, getAsteriskTags, getFitSingleCellUnitFunction
Methods inherited from Model:
fit, getAlias, getAsteriskTags, getDataSet, getFullName, getName, getPath, getRootPath, getTags, setAlias, setTags
Methods inherited from Object:
asThis, $, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clone, detach, equals, extend, finalize, gc, getEnvironment, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, objectSize, print, registerFinalizer, save
TO DO.
Henrik Bengtsson (http://www.braju.com/R/)