UgpGenomeInformation {aroma.affymetrix} | R Documentation |
Package: aroma.affymetrix
Class UgpGenomeInformation
Object
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GenericDataFile
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GenomeInformation
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UgpGenomeInformation
Directly known subclasses:
public static class UgpGenomeInformation
extends GenomeInformation
This class represents Aroma UGP genome information files.
UgpGenomeInformation(..., .ugp=NULL, .verify=TRUE)
... |
Arguments passed to GenomeInformation . |
.ugp |
For internal use only. |
.verify |
For internal use only. |
Methods:
byChipType | Defines a UgpGenomeInformation object by chip type. | |
clearCache | - | |
getChipType | - | |
getChromosomes | - | |
getData | - | |
getUnitsOnChromosome | - | |
isCompatibleWithCdf | - | |
nbrOfUnits | - | |
readDataFrame | - |
Methods inherited from GenomeInformation:
byChipType, fromCdf, fromDataSet, getChipType, getChromosomes, getChromosomeStats, getData, getPositions, getUnitIndices, getUnitsOnChromosome, getUnitsOnChromosomes, isCompatibleWithCdf, nbrOfUnits, plotDensity, readDataFrame
Methods inherited from GenericDataFile:
compareChecksum, copyTo, equals, fromFile, getAlias, getAttribute, getAttributes, getChecksum, getCreatedOn, getFilename, getFileSize, getFileType, getFullName, getFullNameTranslator, getLastAccessedOn, getLastModifiedOn, getName, getPath, getPathname, getTags, gunzip, gzip, hasBeenModified, hasTag, hasTags, isFile, readChecksum, renameTo, renameToUpperCaseExt, setAlias, setAttribute, setAttributes, setAttributesBy, setAttributesByTags, setFullName, setFullNameTranslator, setName, testAttributes, validateChecksum, writeChecksum
Methods inherited from Object:
asThis, $, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clone, detach, equals, extend, finalize, gc, getEnvironment, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, objectSize, print, registerFinalizer, save
Henrik Bengtsson (http://www.braju.com/R/)