BackgroundCorrection {aroma.affymetrix} | R Documentation |
Package: aroma.affymetrix
Class BackgroundCorrection
Object
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AromaTransform
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Transform
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ProbeLevelTransform
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BackgroundCorrection
Directly known subclasses:
GcRmaBackgroundCorrection, LimmaBackgroundCorrection, NormExpBackgroundCorrection, OpticalBackgroundCorrection, RmaBackgroundCorrection
public abstract static class BackgroundCorrection
extends ProbeLevelTransform
This class represents a background adjustment function.
BackgroundCorrection(..., subsetToUpdate=NULL, typesToUpdate=NULL)
... |
Arguments passed to the constructor of
ProbeLevelTransform . |
subsetToUpdate |
The probes to be updated.
If NULL , all probes are updated. |
typesToUpdate |
Types of probes to be updated. |
Methods:
process | Processes the data set. |
Methods inherited from Transform:
getOutputDataSet, getOutputDataSetOLD20090509, getOutputFiles
Methods inherited from AromaTransform:
getExpectedOutputFiles, getExpectedOutputFullnames, getFullName, getInputDataSet, getName, getOutputDataSet, getOutputDataSet0, getOutputFiles, getPath, getTags, isDone, process, setTags
Methods inherited from Object:
asThis, $, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clone, detach, equals, extend, finalize, gc, getEnvironment, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, objectSize, print, registerFinalizer, save
Ken Simpson (ksimpson[at]wehi.edu.au).