GcContentNormalization2 {aroma.affymetrix} | R Documentation |
Package: aroma.affymetrix
Class GcContentNormalization2
Object
~~|
~~+--
AromaTransform
~~~~~~~|
~~~~~~~+--
Transform
~~~~~~~~~~~~|
~~~~~~~~~~~~+--
ChipEffectTransform
~~~~~~~~~~~~~~~~~|
~~~~~~~~~~~~~~~~~+--
AdditiveCovariatesNormalization
~~~~~~~~~~~~~~~~~~~~~~|
~~~~~~~~~~~~~~~~~~~~~~+--
GcContentNormalization2
Directly known subclasses:
public static class GcContentNormalization2
extends AdditiveCovariatesNormalization
This class represents a normalization method that corrects for annotation-data covariate effects on copy-number chip-effect estimates.
GcContentNormalization2(...)
... |
Arguments passed to the constructor of
AdditiveCovariatesNormalization . |
Methods:
plotCovariateEffects | - |
Methods inherited from AdditiveCovariatesNormalization:
clearCache, getCdf, getCovariates, getOutputDataSet00, process
Methods inherited from Transform:
getOutputDataSet, getOutputDataSetOLD20090509, getOutputFiles
Methods inherited from AromaTransform:
getExpectedOutputFiles, getExpectedOutputFullnames, getFullName, getInputDataSet, getName, getOutputDataSet, getOutputDataSet0, getOutputFiles, getPath, getTags, isDone, process, setTags
Methods inherited from Object:
asThis, $, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clone, detach, equals, extend, finalize, gc, getEnvironment, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, objectSize, print, registerFinalizer, save
Henrik Bengtsson (http://www.braju.com/R/)