CnagCfhFile {aroma.affymetrix} | R Documentation |
Package: aroma.affymetrix
Class CnagCfhFile
Object
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~~+--
GenericDataFile
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AromaMicroarrayDataFile
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AromaPlatformInterface
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~~~~~~~~~~~~~~~~~+--
AffymetrixFile
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CnagCfhFile
Directly known subclasses:
public abstract static class CnagCfhFile
extends AffymetrixFile
A CnagCfhFile object represents a single CNAG CFH file.
CnagCfhFile(..., cdf=NULL)
... |
Arguments passed to AromaMicroarrayDataFile . |
cdf |
An optional AffymetrixCdfFile |
Methods:
[ | - | |
[[ | - | |
clone | - | |
fromFile | Defines an CnagCfhFile object from a CFH file. | |
getCdf | Gets the CDF structure for this CEL file. | |
nbrOfCells | - | |
nbrOfSnps | - | |
setCdf | Sets the CDF structure for this CEL file. |
Methods inherited from AromaPlatformInterface:
getAromaPlatform, getPlatform, getUnitAnnotationDataFile, getUnitNamesFile, getUnitTypesFile
Methods inherited from AromaMicroarrayDataFile:
getAttributeXY, getChipType, getPlatform, getPloidy, hasAttributeXY, setAttributesByTags, setAttributeXY
Methods inherited from GenericDataFile:
compareChecksum, copyTo, equals, fromFile, getAlias, getAttribute, getAttributes, getChecksum, getCreatedOn, getFilename, getFileSize, getFileType, getFullName, getFullNameTranslator, getLastAccessedOn, getLastModifiedOn, getName, getPath, getPathname, getTags, gunzip, gzip, hasBeenModified, hasTag, hasTags, isFile, readChecksum, renameTo, renameToUpperCaseExt, setAlias, setAttribute, setAttributes, setAttributesBy, setAttributesByTags, setFullName, setFullNameTranslator, setName, testAttributes, validateChecksum, writeChecksum
Methods inherited from Object:
asThis, $, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clone, detach, equals, extend, finalize, gc, getEnvironment, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, objectSize, print, registerFinalizer, save
Henrik Bengtsson (http://www.braju.com/R/)
An object of this class is typically part of an CnagCfhSet
.