AlleleSummation {aroma.affymetrix} | R Documentation |
Package: aroma.affymetrix
Class AlleleSummation
Object
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Model
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UnitModel
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AlleleSummation
Directly known subclasses:
public abstract static class AlleleSummation
extends UnitModel
This class takes allele-specific chip effect estimates of a SnpChipEffectSet and returns a CnChipEffectSet holding the summed allele estimates.
AlleleSummation(dataSet=NULL, ignoreNAs=TRUE, ...)
dataSet |
A SnpChipEffectSet . |
ignoreNAs |
If TRUE , missing values are excluded when summing
the signals from the two alleles. |
... |
Arguments passed to UnitModel . |
Methods:
findUnitsTodo | - | |
getAsteriskTags | - | |
getChipEffectSet | Gets the set of chip effects for this model. | |
process | - |
Methods inherited from UnitModel:
findUnitsTodo, getAsteriskTags, getFitSingleCellUnitFunction
Methods inherited from Model:
fit, getAlias, getAsteriskTags, getDataSet, getFullName, getName, getPath, getRootPath, getTags, setAlias, setTags
Methods inherited from Object:
asThis, $, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clone, detach, equals, extend, finalize, gc, getEnvironment, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, objectSize, print, registerFinalizer, save
Henrik Bengtsson (http://www.braju.com/R/)