PCIT algorithm - Partial Correlation Coefficient with Information Theory


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Documentation for package ‘PCIT’ version 1.01-1

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PCIT-package Partial Correlation coefficient with Information Theory (PCIT)
clusteringCoefficient Calculate the clustering coefficient for each node/gene of an adjacency matrix
clusteringCoefficientPercent Calculate the clustering coefficient measured as the percentage of non-zero correlation coefficients
data PCIT Data Sets
defineTasks Defines a list of tasks to be undertaken by slave CPUs
m1 PCIT Data Sets
m2 PCIT Data Sets
m3 PCIT Data Sets
pcit Apply the PCIT algorithm to a correlation matrix
plotCorCoeff Superimpose a histogram of significant correlation coefficients over all correlation coefficents