# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4 PortSystem 1.0 PortGroup mpi 1.0 PortGroup linear_algebra 1.0 name octopus version 12.1 revision 1 categories science platforms darwin license GPL-2+ maintainers {dstrubbe @dstrubbe} description A real-space (time-dependent) density-functional theory code. long_description Octopus is a scientific program aimed at ab initio virtual experimentation \ on a hopefully ever-increasing range of system types. \ Electrons are described quantum-mechanically within density-functional \ theory (DFT), in its time-dependent form (TDDFT) when doing simulations \ in time. Nuclei are described classically as point particles. Electron-nucleus \ interaction is described within the pseudopotential approximation. homepage https://octopus-code.org master_sites ${homepage}/download/${version} checksums rmd160 a44b0b1311950dc10cd07b4c0d62e0ea073bdc14 \ sha256 e2214e958f1e9631dbe6bf020c39f1fe4d71ab0b6118ea9bd8dc38f6d7a7959a \ size 59224351 compilers.choose fc cc cxx mpi.setup require_fortran -g95 -clang -gfortran #-clang33 -clang34 -clang38 # not clear if clang33 and clang34 work; clang38 gives cxx11 error as does default clang. # clang fails in tests, relating to pseudopotentials and XML # this incorrectly passes if libxc +gcc5, octopus +mpich, mpich-default +gcc49 compilers.enforce_fortran libxc4 compilers.enforce_some_fortran fftw-3 depends_lib port:libxc4 port:fftw-3 port:gsl configure.args --with-libxc-prefix=${prefix} --with-fftw-prefix=${prefix} \ --disable-gdlib --without-sparskit --with-netcdf-prefix=no \ --with-etsf-io-prefix=no --with-berkeleygw-prefix=no \ --with-arpack=no --with-parpack=no --with-feast=no \ --with-isf-prefix=no --with-pnfft-prefix=no --with-metis-prefix=no \ --with-parmetis-prefix=no --with-libfm=no --with-pfft-prefix=no \ --with-pspio-prefix=no --with-nfft=no --with-blacs=no \ --with-scalapack=no # configure will find and use these other libraries unless they are explicitly disabled configure.optflags -O3 configure.fcflags-append -ffree-line-length-none # gfortran -> gfortran5? if {[mpi_variant_isset]} { configure.args-delete --disable-mpi configure.args-append --enable-mpi } # avoid gcc10 compilation type mismatch errors in basic/io_binary_f_inc.F90 compilers.allow_arguments_mismatch yes pre-configure { configure.args-append --with-blas="-L${prefix}/lib ${linalglib}" configure.cxx_stdlib libstdc++ if {![gcc_variant_isset]} { # needed for clang; clang_variant_isset would miss case of default clang compiler. configure.cxxflags-append "-std=c++11" } if {[gcc_variant_isset]} { # avoid BOZ literal constant error in math/fft.F90 configure.fcflags-append "-fallow-invalid-boz" } # not necessary unless mixing clang++ and gfortran; # found automatically when using MPI wrappers if {![gcc_variant_isset] && ![mpi_variant_isset]} { configure.ldflags-append "-lc++" } } # libxc does not have universal variant, so octopus cannot either universal_variant no test.run yes test.target check pre-test { if {[mpi_variant_isset]} { test.env-append MPIEXEC=${prefix}/bin/${mpi.exec} } # test infrastructure uses /bin/ps for job parallelism which is forbidden by sandboxing append portsandbox_profile " (allow process-exec (literal \"/bin/ps\") (with no-profile))" } variant threads description {Build with OpenMP and threaded libraries} { configure.args-append --enable-openmp } variant netcdf description {Build with support for NetCDF output} { configure.args-delete --with-netcdf-prefix=no configure.args-append --with-netcdf-prefix=${prefix} depends_lib-append port:netcdf-fortran require_active_variants netcdf-fortran {} universal compilers.enforce_fortran netcdf-fortran } variant etsf_io requires netcdf description {Build with support for ETSF_IO output} { configure.args-delete --with-etsf-io-prefix=no configure.args-append --with-etsf-io-prefix=${prefix} depends_lib-append port:etsf_io compilers.enforce_fortran etsf_io } variant sparskit description {Build with support for SPARSKIT propagators} { configure.args-delete --without-sparskit configure.args-append --with-sparskit=${prefix}/lib/libskit.a depends_lib-append port:sparskit } variant gdlib description {Build with support for definition of domain by 2D image} { configure.args-delete --disable-gdlib depends_lib-append port:gd2 } variant scalapack description {Build with ScaLAPACK for parallel linear algebra} { configure.args-delete --with-blacs=no configure.args-delete --with-scalapack=no configure.args-append --with-blacs=${prefix}/lib/libscalapack.dylib depends_lib-append port:scalapack mpi.enforce_variant scalapack } # temporarily disabled: causing test failures where used. #variant pfft description {Build with PFFT} { # depends_lib-append port:pfft # configure.args-delete --with-pfft-prefix=no # configure.args-append --with-pfft-prefix=${prefix} --with-mpifftw-prefix=${prefix} # mpi.enforce_variant pfft #} variant arpack description {Build with ARPACK for complex-scaling calculations} { depends_lib-append port:arpack configure.args-delete --with-arpack=no configure.args-append --with-arpack=${prefix}/lib/libarpack.dylib } variant parpack requires arpack description {Build with PARPACK for complex-scaling calculations} { configure.args-delete --with-parpack=no configure.args-append --with-parpack=${prefix}/lib/libparpack.dylib mpi.enforce_variant parpack } # there is not much value in having a stand-alone metis variant, since it is a built-in library in octopus variant parmetis description {Build with ParMETIS for parallel domain decomposition calculation} { depends_lib-append port:parmetis require_active_variants metis single configure.args-delete --with-metis-prefix=no configure.args-delete --with-parmetis-prefix=no configure.args-append --with-metis-prefix=${prefix} --with-parmetis-prefix=${prefix} mpi.enforce_variant parmetis } variant berkeleygw description {Build with BerkeleyGW output support} { depends_lib-append port:berkeleygw configure.args-delete --with-berkeleygw-prefix=no configure.args-append --with-berkeleygw-prefix=${prefix} compilers.enforce_fortran berkeleygw # FIXME: actually, it is ok if berkeleygw does not have MPI and Octopus does mpi.enforce_variant berkeleygw } variant everything_serial requires arpack etsf_io netcdf sparskit gdlib berkeleygw \ description {Build with all available serial optional dependencies} { } variant everything requires everything_serial parpack scalapack parmetis \ description {Build with all available optional dependencies} { } variant maxdim4 description {Build with support for 4D calculations} { configure.args-append --with-max-dim=4 } post-destroot { # FIXME upstream: shouldn't install this either delete ${destroot}${prefix}/include/yaml.h } livecheck.type regex livecheck.url ${homepage}/wiki/Main_Page livecheck.regex (\[0-9.\]+) released